| Enrichr: a comprehensive gene set enrichment analysis web server 2016 update MV Kuleshov, MR Jones, AD Rouillard, NF Fernandez, Q Duan, Z Wang, ... Nucleic acids research 44 (W1), W90-W97, 2016 | 9255 | 2016 |
| Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool EY Chen, CM Tan, Y Kou, Q Duan, Z Wang, GV Meirelles, NR Clark, ... BMC bioinformatics 14, 1-14, 2013 | 7315 | 2013 |
| Single-cell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis TS Adams, JC Schupp, S Poli, EA Ayaub, N Neumark, F Ahangari, ... Science advances 6 (28), eaba1983, 2020 | 1069 | 2020 |
| Minimal differentiation of classical monocytes as they survey steady-state tissues and transport antigen to lymph nodes C Jakubzick, EL Gautier, SL Gibbings, DK Sojka, A Schlitzer, TE Johnson, ... Immunity 39 (3), 599-610, 2013 | 978 | 2013 |
| LINCS Canvas Browser: interactive web app to query, browse and interrogate LINCS L1000 gene expression signatures Q Duan, C Flynn, M Niepel, M Hafner, JL Muhlich, NF Fernandez, ... Nucleic acids research 42 (W1), W449-W460, 2014 | 344 | 2014 |
| L1000CDS2: LINCS L1000 characteristic direction signatures search engine Q Duan, SP Reid, NR Clark, Z Wang, NF Fernandez, AD Rouillard, ... NPJ systems biology and applications 2 (1), 1-12, 2016 | 306 | 2016 |
| Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd Z Wang, CD Monteiro, KM Jagodnik, NF Fernandez, GW Gundersen, ... Nature communications 7 (1), 12846, 2016 | 297 | 2016 |
| The characteristic direction: a geometrical approach to identify differentially expressed genes NR Clark, KS Hu, AS Feldmann, Y Kou, EY Chen, Q Duan, A Ma’ayan BMC bioinformatics 15, 1-16, 2014 | 204 | 2014 |
| Activation of tumor suppressor protein PP2A inhibits KRAS-driven tumor growth J Sangodkar, A Perl, R Tohme, J Kiselar, DB Kastrinsky, N Zaware, ... The Journal of clinical investigation 127 (6), 2081-2090, 2017 | 203 | 2017 |
| Lean Big Data integration in systems biology and systems pharmacology A Ma’ayan, AD Rouillard, NR Clark, Z Wang, Q Duan, Y Kou Trends in pharmacological sciences 35 (9), 450-460, 2014 | 117 | 2014 |
| Common and cell-type specific responses to anti-cancer drugs revealed by high throughput transcript profiling M Niepel, M Hafner, Q Duan, Z Wang, EO Paull, M Chung, X Lu, JM Stuart, ... Nature communications 8 (1), 1186, 2017 | 98 | 2017 |
| B-myb is an essential regulator of hematopoietic stem cell and myeloid progenitor cell development SJ Baker, A Ma’ayan, YK Lieu, P John, MVR Reddy, EY Chen, Q Duan, ... Proceedings of the National Academy of Sciences 111 (8), 3122-3127, 2014 | 55 | 2014 |
| Enrichr: A comprehensive gene set enrichment analysis web server 2016 update., 2016, 44, pp MV Kuleshov, MR Jones, AD Rouillard, NF Fernandez, Q Duan, Z Wang, ... W90-W97. DOI: https://doi. org/10.1093/nar/gkw377, 0 | 52 | |
| Cell-specific prediction and application of drug-induced gene expression profiles R Hodos, P Zhang, HC Lee, Q Duan, Z Wang, NR Clark, A Ma'ayan, ... Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing 23, 32, 2018 | 43 | 2018 |
| Singlecell RNA-seq reveals ectopic and aberrant lung-resident cell populations in idiopathic pulmonary fibrosis. Sci. Adv. 6, eaba1983 TS Adams, JC Schupp, S Poli, EA Ayaub, N Neumark, F Ahangari, ... | 32 | 2020 |
| ChEA2: gene-set libraries from ChIP-X experiments to decode the transcription regulome Y Kou, EY Chen, NR Clark, Q Duan, CM Tan, A Ma ‘ayan Availability, Reliability, and Security in Information Systems and HCI: IFIP …, 2013 | 23 | 2013 |
| Metasignatures identify two major subtypes of breast cancer Q Duan, Y Kou, NR Clark, S Gordonov, A Ma'ayan CPT: pharmacometrics & systems pharmacology 2 (3), 1-10, 2013 | 22 | 2013 |
| Drug/Cell-line Browser: interactive canvas visualization of cancer drug/cell-line viability assay datasets Q Duan, Z Wang, NF Fernandez, AD Rouillard, CM Tan, CH Benes, ... Bioinformatics 30 (22), 3289-3290, 2014 | 11 | 2014 |
| Mutation of pfm affects the adherence of Pseudomonas aeruginosa to host cells and the quorum sensing system R Mou, F Bai, Q Duan, X Wang, H Xu, Y Bai, X Zhang, S Jin, M Qiao FEMS microbiology letters 324 (2), 173-180, 2011 | 11 | 2011 |
| Single Cell RNA-seq reveals ectopic and aberrant lung resident cell populations in Idiopathic Pulmonary Fibrosis. bioRxiv, 759902 TS Adams, JC Schupp, S Poli, EA Ayaub, N Neumark, F Ahangari, ... Preprint at https://doi. org/10.1101/759902, 2019 | 8 | 2019 |
Avi Ma'ayanProfessor, Icahn School of Medicine at Mount Sinai, New York, NYVerifierad e-postadress på mssm.edu