Comparative genomics reveals insights into avian genome evolution and adaptation G Zhang, C Li, Q Li, B Li, DM Larkin, C Lee, JF Storz, A Antunes, ... Science 346 (6215), 1311-1320, 2014 | 1093 | 2014 |
Genome-wide adaptive complexes to underground stresses in blind mole rats Spalax X Fang, E Nevo, L Han, EY Levanon, J Zhao, A Avivi, D Larkin, X Jiang, ... Nature communications 5 (1), 3966, 2014 | 182 | 2014 |
Upgrading short-read animal genome assemblies to chromosome level using comparative genomics and a universal probe set J Damas, R O'Connor, M Farré, VPE Lenis, HJ Martell, A Mandawala, ... Genome research 27 (5), 875-884, 2017 | 124 | 2017 |
Reconstruction and evolutionary history of eutherian chromosomes J Kim, M Farré, L Auvil, B Capitanu, DM Larkin, J Ma, HA Lewin Proceedings of the National Academy of Sciences 114 (27), E5379-E5388, 2017 | 120 | 2017 |
Reconstruction of gross avian genome structure, organization and evolution suggests that the chicken lineage most closely resembles the dinosaur avian ancestor MN Romanov, M Farré, PE Lithgow, KE Fowler, BM Skinner, R O’Connor, ... BMC genomics 15, 1-18, 2014 | 111 | 2014 |
Evolution of recombination in eutherian mammals: insights into mechanisms that affect recombination rates and crossover interference J Segura, L Ferretti, S Ramos-Onsins, L Capilla, M Farré, F Reis, ... Proceedings of the Royal Society B: Biological Sciences 280 (1771), 20131945, 2013 | 103 | 2013 |
Third Report on Chicken Genes and Chromosomes 2015Prepared by M Schmid, J Smith, DW Burt, BL Aken, PB Antin, AL Archibald, C Ashwell, ... Cytogenetic and genome research 145 (2), 78-179, 2015 | 99 | 2015 |
Recombination rates and genomic shuffling in human and chimpanzee—a new twist in the chromosomal speciation theory M Farré, D Micheletti, A Ruiz-Herrera Molecular Biology and Evolution 30 (4), 853-864, 2013 | 94 | 2013 |
Population structure and history of the Welsh sheep breeds determined by whole genome genotyping SE Beynon, GT Slavov, M Farré, B Sunduimijid, K Waddams, B Davies, ... BMC genetics 16, 1-15, 2015 | 89 | 2015 |
Extreme heterogeneity in sex chromosome differentiation and dosage compensation in livebearers I Darolti, AE Wright, BA Sandkam, J Morris, NI Bloch, M Farré, RC Fuller, ... Proceedings of the National Academy of Sciences 116 (38), 19031-19036, 2019 | 87 | 2019 |
Novel insights into chromosome evolution in birds, archosaurs, and reptiles M Farre, J Narayan, GT Slavov, J Damas, L Auvil, C Li, ED Jarvis, DW Burt, ... Genome biology and evolution 8 (8), 2442-2451, 2016 | 81 | 2016 |
Global gene expression and focused knockout analysis reveals genes associated with fungal fruiting body development in Neurospora crassa Z Wang, F Lopez-Giraldez, N Lehr, M Farré, R Common, F Trail, ... Eukaryotic cell 13 (1), 154-169, 2014 | 78 | 2014 |
Reconstruction of the diapsid ancestral genome permits chromosome evolution tracing in avian and non-avian dinosaurs RE O’Connor, MN Romanov, LG Kiazim, PM Barrett, M Farré, J Damas, ... Nature communications 9 (1), 1883, 2018 | 76 | 2018 |
Reconstruction of avian ancestral karyotypes reveals differences in the evolutionary history of macro-and microchromosomes J Damas, J Kim, M Farré, DK Griffin, DM Larkin Genome biology 19, 1-16, 2018 | 73 | 2018 |
An Integrative Breakage Model of genome architecture, reshuffling and evolution: The Integrative Breakage Model of genome evolution, a novel multidisciplinary … M Farré, TJ Robinson, A Ruiz‐Herrera Bioessays 37 (5), 479-488, 2015 | 73 | 2015 |
Chromosome-level assembly reveals extensive rearrangement in saker falcon and budgerigar, but not ostrich, genomes RE O’Connor, M Farré, S Joseph, J Damas, L Kiazim, R Jennings, ... Genome Biology 19, 1-15, 2018 | 71 | 2018 |
Molecular cytogenetic and genomic insights into chromosomal evolution A Ruiz-Herrera, M Farré, TJ Robinson Heredity 108 (1), 28-36, 2012 | 71 | 2012 |
Evolution of the ancestral mammalian karyotype and syntenic regions J Damas, M Corbo, J Kim, J Turner-Maier, M Farré, DM Larkin, OA Ryder, ... Proceedings of the National Academy of Sciences 119 (40), e2209139119, 2022 | 65 | 2022 |
Assessing the role of tandem repeats in shaping the genomic architecture of great apes M Farré, M Bosch, F López-Giráldez, M Ponsà, A Ruiz-Herrera PLoS One 6 (11), e27239, 2011 | 60 | 2011 |
Evolution of gene regulation in ruminants differs between evolutionary breakpoint regions and homologous synteny blocks M Farré, J Kim, AA Proskuryakova, Y Zhang, AI Kulemzina, Q Li, Y Zhou, ... Genome research 29 (4), 576-589, 2019 | 52 | 2019 |