Nikolaus Sonnenschein

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Medförfattare

Markus HerrgardCTO, BioInnovation InstituteVerifierad e-postadress på bii.dk
Benjamín J. SánchezSenior Research Scientist @ NovonesisVerifierad e-postadress på novonesis.com
Jens NielsenProfessor in Systems Biology, Chalmers University of Technology, SwedenVerifierad e-postadress på chalmers.se
Christian LievenNovo Nordisk Foundation Center for BiosustainabilityVerifierad e-postadress på biosustain.dtu.dk
Kristian JensenTechnical University of DenmarkVerifierad e-postadress på biosustain.dtu.dk
Moritz Emanuel BeberUnseen Bio ApSVerifierad e-postadress på unseenbio.com
Marc HüttProfessor of Computational Systems Biology, Constructor UniversityVerifierad e-postadress på constructor.university
Eduard J KerkhovenDocent, Chalmers University of TechnologyVerifierad e-postadress på chalmers.se
Iván DomenzainChalmers University of Technology | AixBioVerifierad e-postadress på chalmers.se
Andreas DrägerProfessor for Data Analytics and BioinformaticsVerifierad e-postadress på informatik.uni-halle.de
Nathan E LewisGRA Eminent Scholar and Professor, University of GeorgiaVerifierad e-postadress på uga.edu
Zachary A. KingVerifierad e-postadress på ucsd.edu
Ali EbrahimUniversity of California, San DiegoVerifierad e-postadress på ucsd.edu
Michael Krogh JensenSenior researcher, Technical University of Denmark; CEO & Co-founder at BiomiaVerifierad e-postadress på biosustain.dtu.dk
Irina BorodinaThe Novo Nordisk Foundation Center for Biosustainability, Technical University of DenmarkVerifierad e-postadress på biosustain.dtu.dk
Daniel C. ZielinskiProject Scientist, University of California San DiegoVerifierad e-postadress på ucsd.edu
Rebecca M LennenSenior Researcher, Novo Nordisk Foundation Center for Biosustainability, Technical University ofVerifierad e-postadress på biosustain.dtu.dk
Jay KeaslingProfessor of Chemical & Biomolecular Engineering and of Bioengineering, University of CaliforniaVerifierad e-postadress på lbl.gov
Jie ZhangNovo Nordisk Foundation Center for Biosustainability, Technical University of DenmarkVerifierad e-postadress på biosustain.dtu.dk
Aarash BordbarSinopia BiosciencesVerifierad e-postadress på sinopiabio.com

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Nikolaus Sonnenschein

Ginkgo Bioworks

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Biotechnology


Titel Sortera efter citat Sortera efter år Sortera efter titel	Citeras av Citeras av	År
A community-driven global reconstruction of human metabolism I Thiele, N Swainston, RMT Fleming, A Hoppe, S Sahoo, MK Aurich, ... Nature biotechnology 31 (5), 419-425, 2013	1229	2013
Escher: a web application for building, sharing, and embedding data-rich visualizations of biological pathways ZA King, A Dräger, A Ebrahim, N Sonnenschein, NE Lewis, BO Palsson PLoS computational biology 11 (8), e1004321, 2015	419	2015
MEMOTE for standardized genome-scale metabolic model testing C Lieven, ME Beber, BG Olivier, FT Bergmann, M Ataman, P Babaei, ... Nature biotechnology 38 (3), 272-276, 2020	415	2020
A consensus S. cerevisiae metabolic model Yeast8 and its ecosystem for comprehensively probing cellular metabolism H Lu, F Li, BJ Sánchez, Z Zhu, G Li, I Domenzain, S Marcišauskas, ... Nature communications 10 (1), 3586, 2019	342	2019
Personalized Whole-Cell Kinetic Models of Metabolism for Discovery in Genomics and Pharmacodynamics A Bordbar, D McCloskey, DC Zielinski, N Sonnenschein, N Jamshidi, ... Cell Systems 1 (4), 283-292, 2015	120	2015
Reconstruction of a catalogue of genome-scale metabolic models with enzymatic constraints using GECKO 2.0 I Domenzain, B Sánchez, M Anton, EJ Kerkhoven, A Millán-Oropeza, ... Nature communications 13 (1), 3766, 2022	112	2022
Evolution reveals a glutathione-dependent mechanism of 3-hydroxypropionic acid tolerance KR Kildegaard, BM Hallström, TH Blicher, N Sonnenschein, NB Jensen, ... Metabolic engineering 26, 57-66, 2014	97	2014
Engineering an NADPH/NADP⁺ Redox Biosensor in Yeast J Zhang, N Sonnenschein, TPB Pihl, KR Pedersen, MK Jensen, ... ACS synthetic biology 5 (12), 1546-1556, 2016	90	2016
Improving reproducibility in synthetic biology MM Jessop-Fabre, N Sonnenschein Frontiers in bioengineering and biotechnology 7, 436850, 2019	89	2019
Integration of enzymatic data in Bacillus subtilis genome-scale metabolic model improves phenotype predictions and enables in silico design of poly-γ-glutamic acid production … MJ Massaiu, I., Pasotti, L., Sonnenschein, N., Rama, E., Cavaletti, M ... Microbial Cell Factories 18 (3), 2019	83	2019
Whole-cell modeling in yeast predicts compartment-specific proteome constraints that drive metabolic strategies IE Elsemman, A Rodriguez Prado, P Grigaitis, M Garcia Albornoz, ... Nature communications 13 (1), 801, 2022	81	2022
Cameo: A Python Library for Computer Aided Metabolic Engineering and Optimization of Cell Factories JGR Cardoso, K Jensen, C Lieven, AS Lærke Hansen, S Galkina, ... ACS synthetic biology 7 (4), 1163-1166, 2018	73	2018
Analog regulation of metabolic demand N Sonnenschein, M Geertz, G Muskhelishvili, MT Hütt BMC systems biology 5 (1), 40, 2011	65	2011
Do genome‐scale models need exact solvers or clearer standards? A Ebrahim, E Almaas, E Bauer, A Bordbar, AP Burgard, RL Chang, ... Molecular Systems Biology 11 (10), 831, 2015	64	2015
A genome-scale metabolic model for Methylococcus capsulatus (Bath) suggests reduced efficiency electron transfer to the particulate methane monooxygenase C Lieven, LAH Petersen, SB Jørgensen, KV Gernaey, MJ Herrgard, ... Frontiers in microbiology 9, 2947, 2018	61	2018
Systems biology solutions for biochemical production challenges ASL Hansen, RM Lennen, N Sonnenschein, MJ Herrgård Current Opinion in Biotechnology 45, 85-91, 2017	57	2017
OptCouple: Joint simulation of gene knockouts, insertions and medium modifications for prediction of growth-coupled strain designs K Jensen, V Broeken, ASL Hansen, N Sonnenschein, MJ Herrgård Metabolic engineering communications 8, e00087, 2019	50	2019
Artefacts in statistical analyses of network motifs: general framework and application to metabolic networks ME Beber, C Fretter, S Jain, N Sonnenschein, M Müller-Hannemann, ... Journal of The Royal Society Interface, 2012	47	2012
Analysis of genetic variation and potential applications in genome-scale metabolic modeling JGR Cardoso, MR Andersen, MJ Herrgård, N Sonnenschein Frontiers in bioengineering and biotechnology 3, 13, 2015	46	2015
Genome-Wide CRISPRi-Based Identification of Targets for Decoupling Growth from Production S Li, CB Jendresen, J Landberg, LE Pedersen, N Sonnenschein, ... ACS Synthetic Biology 9 (5), 1030-1040, 2020	42	2020

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