| Extensive unexplored human microbiome diversity revealed by over 150,000 genomes from metagenomes spanning age, geography, and lifestyle E Pasolli, F Asnicar, S Manara, M Zolfo, N Karcher, F Armanini, F Beghini, ... Cell 176 (3), 649-662. e20, 2019 | 1404 | 2019 |
| Mother-to-infant microbial transmission from different body sites shapes the developing infant gut microbiome P Ferretti, E Pasolli, A Tett, F Asnicar, V Gorfer, S Fedi, F Armanini, ... Cell host & microbe 24 (1), 133-145. e5, 2018 | 1193 | 2018 |
| Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation AM Thomas, P Manghi, F Asnicar, E Pasolli, F Armanini, M Zolfo, ... Nature medicine 25 (4), 667-678, 2019 | 835 | 2019 |
| Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0 F Asnicar, AM Thomas, F Beghini, C Mengoni, S Manara, P Manghi, ... Nature communications 11 (1), 2500, 2020 | 560* | 2020 |
| SARS-CoV-2 from faeces to wastewater treatment: what do we know? A review P Foladori, F Cutrupi, N Segata, S Manara, F Pinto, F Malpei, L Bruni, ... Science of the Total Environment 743, 140444, 2020 | 416 | 2020 |
| Studying vertical microbiome transmission from mothers to infants by strain-level metagenomic profiling F Asnicar, S Manara, M Zolfo, DT Truong, M Scholz, F Armanini, P Ferretti, ... MSystems 2 (1), e00164-16, 2017 | 382* | 2017 |
| The person-to-person transmission landscape of the gut and oral microbiomes M Valles-Colomer, A Blanco-Míguez, P Manghi, F Asnicar, L Dubois, ... Nature 614 (7946), 125-135, 2023 | 284 | 2023 |
| Genomic diversity and ecology of human-associated Akkermansia species in the gut microbiome revealed by extensive metagenomic assembly N Karcher, E Nigro, M Punčochář, A Blanco-Míguez, M Ciciani, P Manghi, ... Genome biology 22 (1), 209, 2021 | 113 | 2021 |
| Analysis of 1321 Eubacterium rectale genomes from metagenomes uncovers complex phylogeographic population structure and subspecies functional adaptations N Karcher, E Pasolli, F Asnicar, KD Huang, A Tett, S Manara, F Armanini, ... Genome biology 21, 1-27, 2020 | 108 | 2020 |
| Whole-genome epidemiology, characterisation, and phylogenetic reconstruction of Staphylococcus aureus strains in a paediatric hospital S Manara, E Pasolli, D Dolce, N Ravenni, S Campana, F Armanini, ... Genome medicine 10, 1-19, 2018 | 88 | 2018 |
| Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species S Manara, F Asnicar, F Beghini, D Bazzani, F Cumbo, M Zolfo, E Nigro, ... Genome biology 20, 1-16, 2019 | 70 | 2019 |
| The rapid spread of SARS-COV-2 Omicron variant in Italy reflected early through wastewater surveillance G La Rosa, M Iaconelli, C Veneri, P Mancini, GB Ferraro, D Brandtner, ... Science of the Total Environment 837, 155767, 2022 | 51 | 2022 |
| Coronaviruses and SARS-CoV-2 in sewerage and their removal: step by step in wastewater treatment plants P Foladori, F Cutrupi, M Cadonna, S Manara Environmental Research 207, 112204, 2022 | 35 | 2022 |
| Methicillin-resistant Staphylococcus aureus eradication in cystic fibrosis patients: A randomized multicenter study D Dolce, S Neri, L Grisotto, S Campana, N Ravenni, F Miselli, E Camera, ... PLoS One 14 (3), e0213497, 2019 | 34 | 2019 |
| Intestinal Blastocystis is linked to healthier diets and more favorable cardiometabolic outcomes in 56,989 individuals from 32 countries E Piperni, LH Nguyen, P Manghi, H Kim, E Pasolli, S Andreu-Sánchez, ... Cell 187 (17), 4554-4570. e18, 2024 | 28 | 2024 |
| The wave of the SARS-CoV-2 Omicron variant resulted in a rapid spike and decline as highlighted by municipal wastewater surveillance F Cutrupi, M Cadonna, S Manara, M Postinghel, G La Rosa, E Suffredini, ... Environmental Technology & Innovation 28, 102667, 2022 | 26 | 2022 |
| MetaPhlAn 4 profiling of unknown species-level genome bins improves the characterization of diet-associated microbiome changes in mice P Manghi, A Blanco-Míguez, S Manara, A NabiNejad, F Cumbo, F Beghini, ... Cell Reports 42 (5), 2023 | 17 | 2023 |
| Birthmode and environment-dependent microbiota transmission dynamics are complemented by breastfeeding during the first year M Selma-Royo, L Dubois, S Manara, F Armanini, R Cabrera-Rubio, ... Cell host & microbe 32 (6), 996-1010. e4, 2024 | 16 | 2024 |
| Maternal and food microbial sources shape the infant microbiome of a rural Ethiopian population S Manara, M Selma-Royo, KD Huang, F Asnicar, F Armanini, ... Current Biology 33 (10), 1939-1950. e4, 2023 | 16 | 2023 |
| Surveillance of SARS-CoV-2 in extensive monitoring of municipal wastewater: key issues to yield reliable results F Cutrupi, M Cadonna, S Manara, P Foladori Water Science and Technology 84 (12), 3508-3514, 2021 | 10 | 2021 |
Nicola SegataDepartment CIBIO, University of TrentoVerifierad e-postadress på unitn.it