| De novo DNA synthesis using polymerase-nucleotide conjugates S Palluk, DH Arlow, T De Rond, S Barthel, JS Kang, R Bector, ... Nature biotechnology 36 (7), 645-650, 2018 | 322 | 2018 |
| Context-aware deconvolution of cell–cell communication with Tensor-cell2cell E Armingol, HM Baghdassarian, C Martino, A Perez-Lopez, C Aamodt, ... Nature communications 13 (1), 3665, 2022 | 67 | 2022 |
| The diversification of methods for studying cell–cell interactions and communication E Armingol, HM Baghdassarian, NE Lewis Nature Reviews Genetics 25 (6), 381-400, 2024 | 54 | 2024 |
| Variant STAT4 and Response to Ruxolitinib in an Autoinflammatory Syndrome H Baghdassarian, SA Blackstone, OS Clay, R Philips, B Matthiasardottir, ... New England Journal of Medicine 388 (24), 2241-2252, 2023 | 39 | 2023 |
| Inferring a spatial code of cell-cell interactions across a whole animal body E Armingol, A Ghaddar, CJ Joshi, H Baghdassarian, I Shamie, J Chan, ... PLoS computational biology 18 (11), e1010715, 2022 | 39 | 2022 |
| Multiple freeze-thaw cycles lead to a loss of consistency in poly (A)-enriched RNA sequencing BP Kellman, HM Baghdassarian, T Pramparo, I Shamie, V Gazestani, ... BMC genomics 22, 1-15, 2021 | 27 | 2021 |
| Learned adaptive multiphoton illumination microscopy for large-scale immune response imaging H Pinkard, H Baghdassarian, A Mujal, E Roberts, KH Hu, DH Friedman, ... Nature communications 12 (1), 1916, 2021 | 21 | 2021 |
| Dysregulation of the secretory pathway connects Alzheimer’s disease genetics to aggregate formation CC Kuo, AWT Chiang, HM Baghdassarian, NE Lewis Cell systems 12 (9), 873-884. e4, 2021 | 17 | 2021 |
| Systems glycobiology for discovering drug targets, biomarkers, and rational designs for glyco-immunotherapy AWT Chiang, HM Baghdassarian, BP Kellman, B Bao, JT Sorrentino, ... Journal of biomedical science 28, 1-15, 2021 | 11 | 2021 |
| Combining LIANA and Tensor-cell2cell to decipher cell-cell communication across multiple samples HM Baghdassarian, D Dimitrov, E Armingol, J Saez-Rodriguez, NE Lewis Cell reports methods 4 (4), 2024 | 10 | 2024 |
| Resource allocation in mammalian systems HM Baghdassarian, NE Lewis Biotechnology Advances 71, 108305, 2024 | 8 | 2024 |
| Unraveling the coordinated dynamics of protein-and metabolite-mediated cell-cell communication E Armingol, RO Larsen, M Cequeira, H Baghdassarian, NE Lewis BioRxiv, 2022.11. 02.514917, 2022 | 8 | 2022 |
| Understanding How Context Influences Function Across Biological Scales in Multicellular Mammalian Systems HM Baghdassarian University of California, San Diego, 2023 | 1 | 2023 |
| Joint linear modeling of transcriptomics and proteomics is predictive of cancer metastasis R Sharma, N Meimetis, A Begzati, SD Nagar, B Kellman, ... bioRxiv, 2025.02. 15.638428, 2025 | | 2025 |
| Library-based single-cell analysis of CAR signaling reveals drivers of in vivo persistence CR Perez, A Garmilla, A Nilsson, HM Baghdassarian, KS Gordon, ... bioRxiv, 2024.04. 29.591541, 2024 | | 2024 |
| A reconstruction of the mammalian secretory pathway identifies mechanisms regulating antibody production H Masson, J Tat, P Di Giusto, A Antonakoudis, I Shamie, ... bioRxiv, 2024.11. 14.623668, 2024 | | 2024 |
| A COMMUNITY-WIDE STUDY OF CELL-CELL COMMUNICATION E Armingol, D Dimitrov, H Baghdassarian | | |
| Tensor-cell2cell: Unraveling the complex cell-cell communication patterns driving phenotype H Baghdassarian | | |