The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update Nucleic Acids Research 50 (W1), W345-W351, 2022 | 462 | 2022 |
The Galaxy platform for accessible, reproducible, and collaborative data analyses: 2024 update Nucleic acids research 52 (W1), W83-W94, 2024 | 88 | 2024 |
Coarse-grained simulations of aqueous thermoresponsive polyethers B Raubenolt, G Gyawali, W Tang, KS Wong, SW Rick Polymers 10 (5), 475, 2018 | 17 | 2018 |
A perspective on protein structure prediction using quantum computers H Doga, B Raubenolt, F Cumbo, J Joshi, FP DiFilippo, J Qin, ... Journal of Chemical Theory and Computation 20 (9), 3359-3378, 2024 | 16 | 2024 |
Molecular dynamics simulations of the flexibility and inhibition of SARS-CoV-2 NSP 13 helicase BA Raubenolt, NN Islam, CM Summa, SW Rick Journal of Molecular Graphics and Modelling 112, 108122, 2022 | 8 | 2022 |
Molecular dynamics simulations of allosteric motions and competitive inhibition of the Zika virus helicase BA Raubenolt, K Wong, SW Rick Journal of Molecular Graphics and Modelling 108, 108001, 2021 | 5 | 2021 |
Simulation studies of polypeptoids using replica exchange with dynamical scaling and dihedral biasing BA Raubenolt, SW Rick Journal of Computational Chemistry 43 (18), 1229-1236, 2022 | 4 | 2022 |
Galaxy workflow for molecular dynamics simulations of coronavirus helicase protein-drug complexes. 2023 B Raubenolt, D Blankenberg | 2 | 2024 |
Galaxy workflow for molecular dynamics simulations of flavivirus helicases in apo form. 2023 B Raubenolt, D Blankenberg | 2 | 2024 |
Galaxy workflow for molecular dynamics simulations of flavivirus helicase protein-drug complexes. 2023 B Raubenolt, D Blankenberg | 2 | 2024 |
Supporting data for" Generalized Open-Source Workflows for Atomistic Molecular Dynamics Simulations of Viral Helicases" R Bryan, B Daniel GigaScience Database, 2024 | 2 | 2024 |
Protein structure files and galaxy workflows for conducting molecular dynamics simulations of coronavirus helicases [Data set]. Zenodo. 2022 B Raubenolt, D Blankenberg | 2 | 2023 |
Protein structure files and Galaxy workflows for conducting molecular dynamics simulations of coronavirus helicases—output files [Data set]. Zenodo. 2023. ht tps B Raubenolt, D Blankenberg doi. org/10.5281/zenodo 7851000, 0 | 2 | |
The next frontier in plastic surgery innovation: Quantum computing BB Ozmen, BA Raubenolt, D Blankenberg, GS Schwarz Journal of Plastic, Reconstructive & Aesthetic Surgery 100, 282-284, 2025 | | 2025 |
Generalized open-source workflows for atomistic molecular dynamics simulations of viral helicases B Raubenolt, D Blankenberg GigaScience 13, giae026, 2024 | | 2024 |
Quantum Resource Estimation for Protein Conformation Prediction B Raubenolt, H Doga, J Qin, D Blankenberg, O Shehab ACM/IEEE Annual International Symposium on Computer Architecture, 2023 | | 2023 |
Applied Molecular Dynamics: from Targeting Viral Helicases, to Understanding the Interactions of Cucurbituril Complexes in Ionic Solutions B Raubenolt | | 2020 |
Allosteric inhibition of the Zika virus NS3 helicase B Raubenolt, K Wong, S Rick ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY 255, 2018 | | 2018 |
A Coarse-Grained Model for Polyethylene Oxide G Gyawali, B Raubenolt, W Tang, KS Wong, SW Rick PAPERS AND EXTENDED ABSTRACTS PRESENTED AT THE UNIVERSITY OF LOUISIANA AT …, 2018 | | 2018 |
Molecular Dynamics of the ZIKA Virus NS3 Helicase B Raubenolt, S Rick APS March Meeting Abstracts 2017, M1. 277, 2017 | | 2017 |