Pushing the boundaries of molecular representation for drug discovery with the graph attention mechanism Z Xiong, D Wang, X Liu, F Zhong, X Wan, X Li, Z Li, X Luo, K Chen, ... Journal of medicinal chemistry 63 (16), 8749-8760, 2019 | 836 | 2019 |
In silico ADME/T modelling for rational drug design Y Wang, J Xing, Y Xu, N Zhou, J Peng, Z Xiong, X Liu, X Luo, C Luo, ... Quarterly reviews of biophysics 48 (4), 488-515, 2015 | 380 | 2015 |
Artificial intelligence in drug design F Zhong, J Xing, X Li, X Liu, Z Fu, Z Xiong, D Lu, X Wu, J Zhao, X Tan, F Li, ... Science China Life Sciences 61, 1191-1204, 2018 | 223 | 2018 |
Graph neural networks for automated de novo drug design J Xiong, Z Xiong, K Chen, H Jiang, M Zheng Drug discovery today 26 (6), 1382-1393, 2021 | 195 | 2021 |
Generative models for de novo drug design X Tong, X Liu, X Tan, X Li, J Jiang, Z Xiong, T Xu, H Jiang, N Qiao, ... Journal of Medicinal Chemistry 64 (19), 14011-14027, 2021 | 157 | 2021 |
Deep learning enhancing kinome-wide polypharmacology profiling: model construction and experiment validation X Li, Z Li, X Wu, Z Xiong, T Yang, Z Fu, X Liu, X Tan, F Zhong, X Wan, ... Journal of medicinal chemistry 63 (16), 8723-8737, 2019 | 66 | 2019 |
Facing small and biased data dilemma in drug discovery with enhanced federated learning approaches Z Xiong, Z Cheng, X Lin, C Xu, X Liu, D Wang, X Luo, Y Zhang, H Jiang, ... Science China Life Sciences, 1-11, 2021 | 59 | 2021 |
Improving the virtual screening ability of target-specific scoring functions using deep learning methods D Wang, C Cui, X Ding, Z Xiong, M Zheng, X Luo, H Jiang, K Chen Frontiers in pharmacology 10, 924, 2019 | 50 | 2019 |
KinomeX: a web application for predicting kinome-wide polypharmacology effect of small molecules Z Li, X Li, X Liu, Z Fu, Z Xiong, X Wu, X Tan, J Zhao, F Zhong, X Wan, ... Bioinformatics 35 (24), 5354-5356, 2019 | 47 | 2019 |
Automated design and optimization of multitarget schizophrenia drug candidates by deep learning X Tan, X Jiang, Y He, F Zhong, X Li, Z Xiong, Z Li, X Liu, C Cui, Q Zhao, ... European Journal of Medicinal Chemistry 204, 112572, 2020 | 38 | 2020 |
Discovery and Development of a Series of Pyrazolo[3,4-d]pyridazinone Compounds as the Novel Covalent Fibroblast Growth Factor Receptor Inhibitors by the … Y Wang, Y Dai, X Wu, F Li, B Liu, C Li, Q Liu, Y Zhou, B Wang, M Zhu, ... Journal of Medicinal Chemistry 62 (16), 7473-7488, 2019 | 30 | 2019 |
PanGu Drug Model: learn a molecule like a human X Lin, C Xu, Z Xiong, X Zhang, N Ni, B Ni, J Chang, R Pan, Z Wang, F Yu, ... Biorxiv, 2022.03. 31.485886, 2022 | 25 | 2022 |
Fine-tuning large language models for chemical text mining W Zhang, Q Wang, X Kong, J Xiong, S Ni, D Cao, B Niu, M Chen, Y Li, ... Chemical Science 15 (27), 10600-10611, 2024 | 22* | 2024 |
HTE and machine learning-assisted development of iridium (I)-catalyzed selective O–H bond insertion reactions toward carboxymethyl ketones Y Xu, F Ren, L Su, Z Xiong, X Zhu, X Lin, N Qiao, H Tian, C Tian, K Liao Organic Chemistry Frontiers 10 (5), 1153-1159, 2023 | 18 | 2023 |
MolFilterGAN: a progressively augmented generative adversarial network for triaging AI-designed molecules X Liu, W Zhang, X Tong, F Zhong, Z Li, Z Xiong, J Xiong, X Wu, Z Fu, ... Journal of Cheminformatics 15 (1), 42, 2023 | 17 | 2023 |
Construction of a deep neural network energy function for protein physics H Yang, Z Xiong, F Zonta Journal of chemical theory and computation 18 (9), 5649-5658, 2022 | 11* | 2022 |
Crowdsourced identification of multi-target kinase inhibitors for RET-and TAU-based disease: The Multi-Targeting Drug DREAM Challenge Z Xiong, M Jeon, RJ Allaway, J Kang, D Park, J Lee, H Jeon, M Ko, ... PLoS Computational Biology 17 (9), e1009302, 2021 | 11 | 2021 |
Quantum-inspired machine learning for molecular docking R Shu, B Liu, Z Xiong, X Cui, Y Li, W Cui, MH Yung, N Qiao arXiv preprint arXiv:2401.12999, 2024 | 10 | 2024 |
FAPM: functional annotation of proteins using multimodal models beyond structural modeling W Xiang, Z Xiong, H Chen, J Xiong, W Zhang, Z Fu, M Zheng, B Liu, Q Shi Bioinformatics 40 (12), btae680, 2024 | 3 | 2024 |
Quantum Molecular Docking with a Quantum-Inspired Algorithm Y Li, X Cui, Z Xiong, B Liu, BY Wang, R Shu, N Qiao, MH Yung Journal of Chemical Theory and Computation 20 (15), 6687-6694, 2024 | 3 | 2024 |