Unsupervised machine learning for exploratory data analysis in imaging mass spectrometry N Verbeeck, RM Caprioli, R Van de Plas Mass spectrometry reviews 39 (3), 245-291, 2020 | 245 | 2020 |
Combined mRNA microarray and proteomic analysis of eutopic endometrium of women with and without endometriosis A Fassbender, N Verbeeck, D Börnigen, CM Kyama, A Bokor, ... Human Reproduction 27 (7), 2020-2029, 2012 | 107 | 2012 |
Evaluation of distance metrics and spatial autocorrelation in uniform manifold approximation and projection applied to mass spectrometry imaging data T Smets, N Verbeeck, M Claesen, A Asperger, G Griffioen, T Tousseyn, ... Analytical chemistry 91 (9), 5706-5714, 2019 | 103 | 2019 |
Proteomics analysis of plasma for early diagnosis of endometriosis A Fassbender, E Waelkens, N Verbeeck, CM Kyama, A Bokor, ... Obstetrics & Gynecology 119 (2 Part 1), 276-285, 2012 | 68 | 2012 |
Connecting imaging mass spectrometry and magnetic resonance imaging-based anatomical atlases for automated anatomical interpretation and differential analysis N Verbeeck, JM Spraggins, MJM Murphy, H Wang, AY Deutch, ... Biochimica et Biophysica Acta (BBA)-Proteins and Proteomics 1865 (7), 967-977, 2017 | 58 | 2017 |
Automated anatomical interpretation of ion distributions in tissue: linking imaging mass spectrometry to curated atlases N Verbeeck, J Yang, B De Moor, RM Caprioli, E Waelkens, R Van de Plas Analytical Chemistry 86 (18), 8974-8982, 2014 | 45 | 2014 |
Spatially aware clustering of ion images in mass spectrometry imaging data using deep learning W Zhang, M Claesen, T Moerman, MR Groseclose, E Waelkens, ... Analytical and bioanalytical chemistry 413, 2803-2819, 2021 | 33 | 2021 |
Toward omics-scale quantitative mass spectrometry imaging of lipids in brain tissue using a multiclass internal standard mixture M Vandenbosch, SM Mutuku, MJQ Mantas, NH Patterson, T Hallmark, ... Analytical Chemistry 95 (51), 18719-18730, 2023 | 20 | 2023 |
Diagnosis of melanoma by imaging mass spectrometry: Development and validation of a melanoma prediction model RN Al‐Rohil, JL Moore, NH Patterson, S Nicholson, N Verbeeck, ... Journal of cutaneous pathology 48 (12), 1455-1462, 2021 | 10 | 2021 |
Wang H. dong; Deutch AY; Caprioli RM; Van de Plas R Connecting Imaging Mass Spectrometry and Magnetic Resonance Imaging-Based Anatomical Atlases for Automated Anatomical … N Verbeeck, JM Spraggins, MJM Murphy Biochim. Biophys. Acta-Proteins Proteomics, 967-977, 1865 | 10 | 1865 |
System for interpretation of image patterns in terms of anatomical or curated patterns RM Caprioli, B De Moor, R Van De Plas, N Verbeeck, E Waelkens US Patent 10,540,536, 2020 | 6 | 2020 |
Datamining of imaging mass spectrometry data for biomedical tissue exploration N Verbeeck | 6 | 2014 |
Integration of multiple spatial omics modalities reveals unique insights into molecular heterogeneity of prostate cancer W Zhang, X Spotbeen, S Vanuytven, S Kint, T Sarretto, F Socciarelli, ... bioRxiv, 2023.08. 28.555056, 2023 | 4 | 2023 |
Multimodal MALDI imaging mass spectrometry for improved diagnosis of melanoma W Zhang, NH Patterson, N Verbeeck, JL Moore, A Ly, RM Caprioli, ... Plos one 19 (5), e0304709, 2024 | 1 | 2024 |
Deeper insights through integration: linking imaging mass spectrometry data with anatomical data N Verbeeck, J Yang, B De Moor, RM Caprioli, E Waelkens, R Van de Plas Proc. 61st ASMS Conference on Mass Spectrom. Allied Topics, 2013 | 1 | 2013 |
Integrating Ambient Mass Spectrometry Imaging and Spatial Transcriptomics on the Same Cancer Tissues to Identify Gene-Metabolite Correlations TM Godfrey, Y Shanneik, W Zhang, T Tran, N Verbeeck, NH Patterson, ... bioRxiv, 2024.12. 20.626670, 2024 | | 2024 |
831 Introducing a software package for integrated visualization and data analysis of spatial omics datasets W Zhang, T Tran, F Wee, WWY Yim, C Joseph, J Lim, LY Chong, ZW Neo, ... Journal for ImmunoTherapy of Cancer 12 (Suppl 2), 2024 | | 2024 |
832 Reproducibility and quality assessment study of xenium and visium spatial transcriptomics assays from multiple carcinoma samples via an end-to-end spatial multi-omics … W Zhang, T Tran, A Ly, B Berger, E Cheung, T Lu, L Zhang, V Sundaram, ... Journal for ImmunoTherapy of Cancer 12 (Suppl 2), 2024 | | 2024 |
213 Concordance assessment study of Xenium and Visium spatial transcriptomics assays using multiple carcinoma samples E Cheung, T Lu, L Zhang, W Zhang, T Tran, A Ly, B Berger, N Verbeeck, ... Journal for ImmunoTherapy of Cancer 12 (Suppl 2), 2024 | | 2024 |
182 Xenium in situ analysis and reproducibility study of multiple carcinomas for clinical studies T Lu, R Gakhar, E Cheung, L Zhang, W Zhang, T Tran, A Ly, B Berger, ... Journal for ImmunoTherapy of Cancer 12 (Suppl 2), 2024 | | 2024 |