| Computer‐assisted synthetic planning: the end of the beginning S Szymkuć, EP Gajewska, T Klucznik, K Molga, P Dittwald, M Startek, ... Angewandte Chemie International Edition 55 (20), 5904-5937, 2016 | 607 | 2016 |
| Efficient syntheses of diverse, medicinally relevant targets planned by computer and executed in the laboratory T Klucznik, B Mikulak-Klucznik, MP McCormack, H Lima, S Szymkuć, ... Chem 4 (3), 522-532, 2018 | 325 | 2018 |
| Jaccard/Tanimoto similarity test and estimation methods for biological presence-absence data NC Chung, BŻ Miasojedow, M Startek, A Gambin BMC bioinformatics 20 (Suppl 15), 644, 2019 | 261 | 2019 |
| Genome-wide analyses of LINE–LINE-mediated nonallelic homologous recombination M Startek, P Szafranski, T Gambin, IM Campbell, P Hixson, CA Shaw, ... Nucleic acids research 43 (4), 2188-2198, 2015 | 102 | 2015 |
| IsoSpec: Hyperfast fine structure calculator MK Łacki, M Startek, D Valkenborg, A Gambin Analytical chemistry 89 (6), 3272-3277, 2017 | 53 | 2017 |
| Algorithmic discovery of tactical combinations for advanced organic syntheses EP Gajewska, S Szymkuć, P Dittwald, M Startek, O Popik, J Mlynarski, ... Chem 6 (1), 280-293, 2020 | 45 | 2020 |
| Genomic parasites or symbionts? Modeling the effects of environmental pressure on transposition activity in asexual populations M Startek, A Le Rouzic, P Capy, D Grzebelus, A Gambin Theoretical population biology 90, 145-151, 2013 | 39 | 2013 |
| midiaPASEF maximizes information content in data-independent acquisition proteomics U Distler, MK Łącki, MP Startek, D Teschner, S Brehmer, J Decker, ... BioRxiv, 2023.01. 30.526204, 2023 | 30 | 2023 |
| OpenTIMS, TimsPY, and TimsR: open and easy access to timsTOF raw data MK Łaçki, MP Startek, S Brehmer, U Distler, S Tenzer Journal of proteome research 20 (4), 2122-2129, 2021 | 30 | 2021 |
| Chromosome conformation capture-on-chip analysis of long-range cis-interactions of the SOX9 promoter M Smyk, P Szafranski, M Startek, A Gambin, P Stankiewicz Chromosome Research 21 (8), 781-788, 2013 | 28 | 2013 |
| Computergestützte Syntheseplanung: Das Ende vom Anfang S Szymkuć, EP Gajewska, T Klucznik, K Molga, P Dittwald, M Startek, ... Angewandte Chemie 128 (20), 6004-6040, 2016 | 27 | 2016 |
| IsoSpec2: ultrafast fine structure calculator MK Łącki, D Valkenborg, MP Startek Analytical chemistry 92 (14), 9472-9475, 2020 | 22 | 2020 |
| OpenMS 3 enables reproducible analysis of large-scale mass spectrometry data J Pfeuffer, C Bielow, S Wein, K Jeong, E Netz, A Walter, O Alka, L Nilse, ... Nature methods 21 (3), 365-367, 2024 | 19 | 2024 |
| The Wasserstein distance as a dissimilarity measure for mass spectra with application to spectral deconvolution S Majewski, MA Ciach, M Startek, W Niemyska, B Miasojedow, A Gambin 18th International Workshop on Algorithms in Bioinformatics (WABI 2018), 25 …, 2018 | 19 | 2018 |
| Masserstein: Linear regression of mass spectra by optimal transport MA Ciach, B Miasojedow, G Skoraczyński, S Majewski, M Startek, ... Rapid Communications in Mass Spectrometry, e8956, 2020 | 12 | 2020 |
| MuTAnT: a family of Mutator-like transposable elements targeting TA microsatellites in Medicago truncatula K Stawujak, M Startek, A Gambin, D Grzebelus Genetica 143 (4), 433-440, 2015 | 11 | 2015 |
| TIRfinder: a web tool for mining class II transposons carrying terminal inverted repeats T Gambin, M Startek, K Walczak, J Paszek, D Grzebelus, A Gambin Evolutionary Bioinformatics 9, EBO. S10619, 2013 | 10 | 2013 |
| masstodon: A Tool for Assigning Peaks and Modeling Electron Transfer Reactions in Top-Down Mass Spectrometry MK Łacki, F Lermyte, B Miasojedow, MP Startek, F Sobott, D Valkenborg, ... Analytical chemistry 91 (3), 1801-1807, 2019 | 9 | 2019 |
| Subset seed extension to protein blast A Gambin, S Lasota, M Startek, M Sykulski, L Noé, G Kucherov International Conference on Bioinformatics Models, Methods and Algorithms 2 …, 2011 | 8 | 2011 |
| Inferring transposons activity chronology by TRANScendence – TEs database and de-novo mining tool MP Startek, J Nogły, A Gromadka, D Grzebelus, A Gambin BMC bioinformatics 18, 57-66, 2017 | 5 | 2017 |
