Transcriptional programs define molecular characteristics of innate lymphoid cell classes and subsets ML Robinette, A Fuchs, VS Cortez, JS Lee, Y Wang, SK Durum, S Gilfillan, ... Nature immunology 16 (3), 306-317, 2015 | 680 | 2015 |
Runx3 programs CD8+ T cell residency in non-lymphoid tissues and tumours JJ Milner, C Toma, B Yu, K Zhang, K Omilusik, AT Phan, D Wang, ... Nature 552 (7684), 253-257, 2017 | 635 | 2017 |
The cis-regulatory atlas of the mouse immune system H Yoshida, CA Lareau, RN Ramirez, SA Rose, B Maier, A Wroblewska, ... Cell 176 (4), 897-912. e20, 2019 | 389 | 2019 |
Expression profiling of constitutive mast cells reveals a unique identity within the immune system DF Dwyer, NA Barrett, KF Austen Nature immunology 17 (7), 878-887, 2016 | 381 | 2016 |
Early transcriptional and epigenetic regulation of CD8+ T cell differentiation revealed by single-cell RNA sequencing B Kakaradov, J Arsenio, CE Widjaja, Z He, S Aigner, PJ Metz, B Yu, ... Nature immunology 18 (4), 422-432, 2017 | 264 | 2017 |
Epigenetic landscapes reveal transcription factors that regulate CD8+ T cell differentiation B Yu, K Zhang, JJ Milner, C Toma, R Chen, JP Scott-Browne, RM Pereira, ... Nature immunology 18 (5), 573-582, 2017 | 239 | 2017 |
Transcriptional repressor ZEB2 promotes terminal differentiation of CD8+ effector and memory T cell populations during infection KD Omilusik, JA Best, B Yu, S Goossens, A Weidemann, JV Nguyen, ... Journal of Experimental Medicine 212 (12), 2027-2039, 2015 | 236 | 2015 |
Heterogeneity and clonal relationships of adaptive immune cells in ulcerative colitis revealed by single-cell analyses BS Boland, Z He, MS Tsai, JG Olvera, KD Omilusik, HG Duong, ES Kim, ... Science immunology 5 (50), eabb4432, 2020 | 211 | 2020 |
The transcription factor Runx3 establishes chromatin accessibility of cis-regulatory landscapes that drive memory cytotoxic T lymphocyte formation D Wang, H Diao, AJ Getzler, W Rogal, MA Frederick, J Milner, B Yu, ... Immunity 48 (4), 659-674. e6, 2018 | 181 | 2018 |
B cell-specific XIST complex enforces X-inactivation and restrains atypical B cells B Yu, Y Qi, R Li, Q Shi, AT Satpathy, HY Chang Cell 184 (7), 1790-1803, 2021 | 174 | 2021 |
Bcl-6 is the nexus transcription factor of T follicular helper cells via repressor-of-repressor circuits J Choi, H Diao, CE Faliti, J Truong, M Rossi, S Bélanger, B Yu, ... Nature immunology 21 (7), 777-789, 2020 | 140 | 2020 |
T-bet transcription factor promotes antibody-secreting cell differentiation by limiting the inflammatory effects of IFN-γ on B cells SL Stone, JN Peel, CD Scharer, CA Risley, DA Chisolm, MD Schultz, B Yu, ... Immunity 50 (5), 1172-1187. e7, 2019 | 120 | 2019 |
Xist ribonucleoproteins promote female sex-biased autoimmunity DR Dou, Y Zhao, JA Belk, Y Zhao, KM Casey, DC Chen, R Li, B Yu, ... Cell 187 (3), 733-749. e16, 2024 | 106 | 2024 |
Mitigation of chromosome loss in clinical CRISPR-Cas9-engineered T cells CA Tsuchida, N Brandes, R Bueno, M Trinidad, T Mazumder, B Yu, ... Cell 186 (21), 4567-4582. e20, 2023 | 100 | 2023 |
Sustained Id2 regulation of E proteins is required for terminal differentiation of effector CD8+ T cells KD Omilusik, MS Nadjsombati, LA Shaw, B Yu, JJ Milner, AW Goldrath Journal of Experimental Medicine 215 (3), 773-783, 2018 | 93 | 2018 |
Signal-induced Brd4 release from chromatin is essential for its role transition from chromatin targeting to transcriptional regulation N Ai, X Hu, F Ding, B Yu, H Wang, X Lu, K Zhang, Y Li, A Han, W Lin, ... Nucleic acids research 39 (22), 9592-9604, 2011 | 63 | 2011 |
Engineered cell entry links receptor biology with single-cell genomics B Yu, Q Shi, JA Belk, KE Yost, KR Parker, R Li, BB Liu, H Huang, ... Cell 185 (26), 4904-4920. e22, 2022 | 48 | 2022 |
A microRNA expression and regulatory element activity atlas of the mouse immune system SA Rose, A Wroblewska, M Dhainaut, H Yoshida, JM Shaffer, ... Nature immunology 22 (7), 914-927, 2021 | 39 | 2021 |
Bromodomain protein BRD4 directs and sustains CD8 T cell differentiation during infection JJ Milner, C Toma, S Quon, K Omilusik, NE Scharping, A Dey, ... Journal of Experimental Medicine 218 (8), 2021 | 30 | 2021 |
DNA architectural protein CTCF facilitates subset-specific chromatin interactions to limit the formation of memory CD8+ T cells S Quon, B Yu, BE Russ, K Tsyganov, H Nguyen, C Toma, M Heeg, ... Immunity 56 (5), 959-978. e10, 2023 | 15 | 2023 |