| Genomic analysis of P elements in natural populations of Drosophila melanogaster CM Bergman, S Han, MG Nelson, V Bondarenko, I Kozeretska PeerJ 5, e3824, 2017 | 19 | 2017 |
| Transposable element profiles reveal cell line identity and loss of heterozygosity in Drosophila cell culture S Han, PJ Basting, GB Dias, A Luhur, AC Zelhof, CM Bergman Genetics 219 (2), iyab113, 2021 | 18 | 2021 |
| Local assembly of long reads enables phylogenomics of transposable elements in a polyploid cell line S Han, GB Dias, PJ Basting, R Viswanatha, N Perrimon, CM Bergman Nucleic Acids Res. 50, gkac794, 2022 | 15 | 2022 |
| Reproducible evaluation of transposable element detectors with McClintock 2 guides accurate inference of Ty insertion patterns in yeast J Chen, PJ Basting, S Han, DJ Garfinkel, CM Bergman Mobile DNA 14 (1), 8, 2023 | 8 | 2023 |
| A novel transposable element-based authentication protocol for Drosophila cell lines D Mariyappa, DB Rusch, S Han, A Luhur, D Overton, DFB Miller, ... G3 12 (2), jkab403, 2022 | 7 | 2022 |
| Ongoing transposition in cell culture reveals the phylogeny of diverse Drosophila S2 sub-lines. S Han, GB Dias, PJ Basting, MG Nelson, S Patel, M Marzo, CM Bergman Genetics, iyac077, 2022 | 6 | 2022 |
| DAGM: A novel modelling framework to assess the risk of HER2-negative breast cancer based on germline rare coding mutations M Yang, Y Fan, ZY Wu, J Gu, Z Feng, Q Zhang, S Han, Z Zhang, X Li, ... EBioMedicine 69, 2021 | 4 | 2021 |
| Reproducible evaluation of short-read transposable element detectors and species-wide data mining of insertion patterns in yeast J Chen, PJ Basting, S Han, DJ Garfinkel, CM Bergman bioRxiv, 2023.02. 13.528343, 2023 | 1 | 2023 |
| MULTI-REGION JOINT DETECTION S Han, D Andrews, VF Onuchic US Patent App. 18/674,279, 2024 | | 2024 |
| REGION-AMBIGUOUS VARIANT DETECTION VF Onuchic, S Han US Patent App. 18/674,538, 2024 | | 2024 |
| Methods and systems for determining copy number variant genotypes S Han, VF Onuchic, X Chen WO Patent WO2024010812A2, 2024 | | 2024 |
| Benchmarking of Germline Copy Number Variant Callers from Whole Genome Sequencing Data for Clinical Applications FM De La Vega, SA Irvine, P Anur, K Potts, L Kraft, R Torres, P Kang, ... medRxiv, 2024.07. 12.24310338, 2024 | | 2024 |
| Performance of Copy Number Variant Detection from ShortRead Whole-Genome Sequencing for Clinical Gene-Panel Applications F De La Vega, P Anur, J Han, S Han, S Irvine, P Kang, L Kraft, Y Lee, ... JOURNAL OF MOLECULAR DIAGNOSTICS 25 (11), S147-S147, 2023 | | 2023 |
| Novel computational strategies for the analysis of transposable elements in Drosophila cell culture genomes S Han University of Georgia, 2021 | | 2021 |
Casey BergmanAssociate Professor, Department of Genetics & Institute of Bioinformatics, University of Georgiaยืนยันอีเมลแล้วที่ uga.edu