| IntegronFinder 2.0: identification and analysis of integrons across bacteria, with a focus on antibiotic resistance in Klebsiella B Néron, E Littner, M Haudiquet, A Perrin, J Cury, EPC Rocha Microorganisms 10 (4), 700, 2022 | 156 | 2022 |
| Selfish, promiscuous and sometimes useful: how mobile genetic elements drive horizontal gene transfer in microbial populations M Haudiquet, JM de Sousa, M Touchon, EPC Rocha Philosophical Transactions of the Royal Society B 377 (1861), 20210234, 2022 | 90 | 2022 |
| Interplay between the cell envelope and mobile genetic elements shapes gene flow in populations of the nosocomial pathogen Klebsiella pneumoniae M Haudiquet, A Buffet, O Rendueles, EPC Rocha PLoS biology 19 (7), e3001276, 2021 | 60 | 2021 |
| Modular prophage interactions driven by capsule serotype select for capsule loss under phage predation JAM de Sousa, A Buffet, M Haudiquet, EPC Rocha, O Rendueles The ISME Journal 14 (12), 2980-2996, 2020 | 49 | 2020 |
| Conservation of antiviral systems across domains of life reveals immune genes in humans J Cury, M Haudiquet, VH Trejo, E Mordret, A Hanouna, M Rotival, ... Cell Host & Microbe 32 (9), 1594-1607. e5, 2024 | 27* | 2024 |
| Capsules and their traits shape phage susceptibility and plasmid conjugation efficiency M Haudiquet, J Le Bris, A Nucci, RA Bonnin, P Domingo-Calap, ... Nature Communications 15 (1), 2032, 2024 | 8 | 2024 |
| How capsules protect the cell, shape genetic exchanges and drive bacterial evolution M Haudiquet Université Paris Cité, 2022 | | 2022 |
