| Deep generative neural network for accurate drug response imputation P Jia, R Hu, G Pei, Y Dai, YY Wang, Z Zhao Nature communications 12 (1), 1740, 2021 | 79 | 2021 |
| WebCSEA: web-based cell-type-specific enrichment analysis of genes Y Dai, R Hu, A Liu, KS Cho, AM Manuel, X Li, X Dong, P Jia, Z Zhao Nucleic acids research 50 (W1), W782-W790, 2022 | 60 | 2022 |
| VISDB: a manually curated database of viral integration sites in the human genome D Tang, B Li, T Xu, R Hu, D Tan, X Song, P Jia, Z Zhao Nucleic acids research 48 (D1), D633-D641, 2020 | 54 | 2020 |
| KinaseMD: kinase mutations and drug response database R Hu, H Xu, P Jia, Z Zhao Nucleic acids research 49 (D1), D552-D561, 2021 | 53 | 2021 |
| Design of new traditional Chinese medicine herbal formulae for treatment of type 2 diabetes mellitus based on network pharmacology HU Rui-Feng, SUN Xiao-Bo Chinese Journal of Natural Medicines 15 (6), 436-441, 2017 | 46 | 2017 |
| 6mA-Finder: a novel online tool for predicting DNA N6-methyladenine sites in genomes H Xu, R Hu, P Jia, Z Zhao Bioinformatics 36 (10), 3257-3259, 2020 | 40 | 2020 |
| Genome-wide correlation of DNA methylation and gene expression in postmortem brain tissues of opioid use disorder patients A Liu, Y Dai, EF Mendez, R Hu, GR Fries, KE Najera, S Jiang, TD Meyer, ... International Journal of Neuropsychopharmacology 24 (11), 879-891, 2021 | 37 | 2021 |
| Angiogenic gene networks are dysregulated in opioid use disorder: evidence from multi-omics and imaging of postmortem human brain EF Mendez, H Wei, R Hu, L Stertz, GR Fries, X Wu, KE Najera, ... Molecular psychiatry 26 (12), 7803-7812, 2021 | 36 | 2021 |
| TSEA-DB: a trait–tissue association map for human complex traits and diseases P Jia, Y Dai, R Hu, G Pei, AM Manuel, Z Zhao Nucleic acids research 48 (D1), D1022-D1030, 2020 | 32 | 2020 |
| LSCplus: a fast solution for improving long read accuracy by short read alignment R Hu, G Sun, X Sun BMC bioinformatics 17, 1-9, 2016 | 28 | 2016 |
| lncRNATargets: a platform for lncRNA target prediction based on nucleic acid thermodynamics R Hu, X Sun Journal of bioinformatics and computational biology 14 (04), 1650016, 2016 | 28 | 2016 |
| DeepFun: a deep learning sequence-based model to decipher non-coding variant effect in a tissue-and cell type-specific manner G Pei, R Hu, P Jia, Z Zhao Nucleic acids research 49 (W1), W131-W139, 2021 | 27 | 2021 |
| White matter deficits in cocaine use disorder: convergent evidence from in vivo diffusion tensor imaging and ex vivo proteomic analysis LP Tondo, TW Viola, GR Fries, B Kluwe-Schiavon, LM Rothmann, ... Translational Psychiatry 11 (1), 252, 2021 | 27 | 2021 |
| Ginsenoside Rb1 prevents hypoxia-reoxygenation-induced apoptosis in H9c2 cardiomyocytes via an estrogen receptor-dependent crosstalk among the Akt, JNK, and ERK 1/2 pathways … Q Ai, G Sun, Y Luo, X Dong, R Hu, X Meng, X Sun Rsc Advances 5 (33), 26346-26363, 2015 | 25 | 2015 |
| CSEA-DB: an omnibus for human complex trait and cell type associations Y Dai, R Hu, AM Manuel, A Liu, P Jia, Z Zhao Nucleic Acids Research 49 (D1), D862-D870, 2021 | 24 | 2021 |
| Salvianolic acid B and ginsenoside re synergistically protect against Ox-LDL-induced endothelial apoptosis through the antioxidative and antiinflammatory mechanisms K Yang, Y Luo, S Lu, R Hu, Y Du, P Liao, G Sun, X Sun Frontiers in Pharmacology 9, 662, 2018 | 24 | 2018 |
| scGWAS: landscape of trait-cell type associations by integrating single-cell transcriptomics-wide and genome-wide association studies P Jia, R Hu, F Yan, Y Dai, Z Zhao Genome biology 23 (1), 220, 2022 | 23 | 2022 |
| Hereditary retinoblastoma iPSC model reveals aberrant spliceosome function driving bone malignancies J Tu, Z Huo, Y Yu, D Zhu, A Xu, MF Huang, R Hu, R Wang, JA Gingold, ... Proceedings of the National Academy of Sciences 119 (16), e2117857119, 2022 | 23 | 2022 |
| A framework for detecting thyroid cancer from ultrasound and histopathological images using deep learning, meta-heuristics, and MCDM algorithms R Sharma, GK Mahanti, G Panda, A Rath, S Dash, S Mallik, R Hu Journal of Imaging 9 (9), 173, 2023 | 20 | 2023 |
| Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations G Pei, R Hu, Y Dai, AM Manuel, Z Zhao, P Jia Nucleic acids research 49 (1), 53-66, 2021 | 20 | 2021 |
