| Multimodal analysis of composition and spatial architecture in human squamous cell carcinoma AL Ji, AJ Rubin, K Thrane, S Jiang, DL Reynolds, RM Meyers, MG Guo, ... Cell 182 (2), 497-514. e22, 2020 | 839 | 2020 |
| Integrating single-cell and spatial transcriptomics to elucidate intercellular tissue dynamics SK Longo, MG Guo, AL Ji, PA Khavari Nature Reviews Genetics 22 (10), 627-644, 2021 | 692 | 2021 |
| Therapy-induced tumour secretomes promote resistance and tumour progression AC Obenauf, Y Zou, AL Ji, S Vanharanta, W Shu, H Shi, X Kong, ... Nature 520 (7547), 368-372, 2015 | 518 | 2015 |
| Coupled single-cell CRISPR screening and epigenomic profiling reveals causal gene regulatory networks AJ Rubin, KR Parker, AT Satpathy, Y Qi, B Wu, AJ Ong, MR Mumbach, ... Cell 176 (1), 361-376. e17, 2019 | 288 | 2019 |
| Spatially resolved clonal copy number alterations in benign and malignant tissue A Erickson, M He, E Berglund, M Marklund, R Mirzazadeh, N Schultz, ... Nature 608 (7922), 360-367, 2022 | 194 | 2022 |
| Super-resolved spatial transcriptomics by deep data fusion L Bergenstråhle, B He, J Bergenstråhle, X Abalo, R Mirzazadeh, K Thrane, ... Nature biotechnology 40 (4), 476-479, 2022 | 122 | 2022 |
| White matter integrity in schizophrenia and bipolar disorder: Tract-and voxel-based analyses of diffusion data from the Connectom scanner D Mamah, A Ji, J Rutlin, JS Shimony NeuroImage: Clinical 21, 101649, 2019 | 45 | 2019 |
| easyCLIP analysis of RNA-protein interactions incorporating absolute quantification DF Porter, W Miao, X Yang, GA Goda, AL Ji, LKH Donohue, MM Aleman, ... Nature Communications 12 (1), 1569, 2021 | 43 | 2021 |
| Tract-based analysis of white matter integrity in psychotic and nonpsychotic bipolar disorder A Ji, D Godwin, J Rutlin, S Kandala, JS Shimony, D Mamah Journal of affective disorders 209, 124-134, 2017 | 30 | 2017 |
| Research techniques made simple: spatial transcriptomics AJ Piñeiro, AE Houser, AL Ji Journal of Investigative Dermatology 142 (4), 993-1001. e1, 2022 | 21 | 2022 |
| IL-33 potentiates histaminergic itch AM Trier, AM Ver Heul, A Fredman, V Le, Z Wang, K Auyeung, J Meixiong, ... Journal of Allergy and Clinical Immunology 153 (3), 852-859. e3, 2024 | 16 | 2024 |
| Single-cell and spatial transcriptomic analysis of human skin delineates intercellular communication and pathogenic cells K Thrane, MCG Winge, H Wang, L Chen, MG Guo, A Andersson, ... Journal of Investigative Dermatology 143 (11), 2177-2192. e13, 2023 | 15 | 2023 |
| The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases AE Houser, A Kazmi, AK Nair, AL Ji JID Innovations 3 (4), 100198, 2023 | 13 | 2023 |
| Molecular profiling in cutaneous melanoma AL Ji, CK Bichakjian, SM Swetter Journal of the National Comprehensive Cancer Network 14 (4), 475-480, 2016 | 9 | 2016 |
| STmut: a framework for visualizing somatic alterations in spatial transcriptomics data of cancer L Chen, D Chang, B Tandukar, D Deivendran, J Pozniak, ... Genome Biology 24 (1), 273, 2023 | 8 | 2023 |
| The spatial landscape of clonal somatic mutations in benign and malignant tissue A Erickson, E Berglund, M He, M Marklund, R Mirzazadeh, N Schultz, ... bioRxiv, 2021.07. 12.452018, 2021 | 7 | 2021 |
| Glucose modulates transcription factor dimerization to enable tissue differentiation V Lopez-Pajares, A Bhaduri, Y Zhao, G Gowrishankar, L Donohue, ... bioRxiv, 2022.11. 28.518222, 2022 | 5 | 2022 |
| Visualizing somatic alterations in spatial transcriptomics data of skin cancer L Chen, D Chang, B Tandukar, D Deivendran, R Cho, J Cheng, ... bioRxiv, 2022.12. 05.519162, 2022 | 4 | 2022 |
| Ambulatory melanoma care patterns in the United States AL Ji, MR Baze, SA Davis, SR Feldman, AB Fleischer Jr Journal of Skin Cancer 2013 (1), 689261, 2013 | 4 | 2013 |
| Type 1 innate lymphoid cells: A biomarker and therapeutic candidate in sarcoidosis I Cho, AL Ji The Journal of Clinical Investigation 134 (17), 2024 | 1 | 2024 |