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James D. Brunner
James D. Brunner
Scientist, Los Alamos National Laboratory
lanl.gov üzerinde doğrulanmış e-posta adresine sahip - Ana Sayfa
Başlık
Alıntı yapanlar
Alıntı yapanlar
Yıl
Minimizing the number of optimizations for efficient community dynamic flux balance analysis
JD Brunner, N Chia
PLoS computational biology 16 (9), e1007786, 2020
252020
Metabolite-mediated modelling of microbial community dynamics captures emergent behaviour more effectively than species–species modelling
JD Brunner, N Chia
Journal of the Royal Society Interface 16 (159), 20190423, 2019
252019
Robust persistence and permanence of polynomial and power law dynamical systems
JD Brunner, G Craciun
SIAM Journal on Applied Mathematics 78 (2), 801-825, 2018
252018
On classes of reaction networks and their associated polynomial dynamical systems
DF Anderson, JD Brunner, G Craciun, MD Johnston
Journal of Mathematical Chemistry 58, 1895-1925, 2020
152020
Metabolic model-based ecological modeling for probiotic design
JD Brunner, N Chia
ELife 13, e83690, 2024
42024
Inferring microbial interactions with their environment from genomic and metagenomic data
JD Brunner, LA Gallegos-Graves, ME Kroeger
PLOS Computational Biology 19 (11), e1011661, 2023
42023
Combining compositional data sets introduces error in covariance network reconstruction
JD Brunner, AJ Robinson, PSG Chain
ISME communications 4 (1), ycae057, 2024
22024
FriendlyNets
J Brunner
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2023
12023
Confidence in the dynamic spread of epidemics under biased sampling conditions
J Brunner, N Chia
PeerJ 8, e9758, 2020
12020
Is Transkingdom Network Analysis Possible?
JD Brunner, AJ Robinson, C Patrick Sam Guy
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2023
2023
MetConSIN
J Brunner
Los Alamos National Laboratory (LANL), Los Alamos, NM (United States), 2023
2023
A dynamical system model for predicting gene expression from the epigenome
J Brunner, J Kim, T Downing, E Mjolsness, KM Kober
arXiv preprint arXiv:2008.01126, 2020
2020
Investigating the role of pairwise interactions in microbial community assembly
J Brunner, N Chia
APS March Meeting Abstracts 2019, P63. 012, 2019
2019
Polynomial Dynamical Systems & Interaction Network Models
JD Brunner
The University of Wisconsin-Madison, 2018
2018
Notes on Computational Mathematics
J Brunner
2013
Uncovering the dynamically changing interaction networks of microbial ecosystems.
JD Brunner, M Kroeger
S1 Text: Existence of desired optimal basis.
JD Brunner, N Chia
STATEMENT OF RESEARCH INTERESTS
J BRUNNER
Permanence of Reaction Network Models
J Brunner
Robust Permanence of Deterministic Reaction Network Models
J Brunner, G Craciun
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Makaleler 1–20