| Proteomic screening for prediction and design of antimicrobial peptides with AmpGram M Burdukiewicz, K Sidorczuk, D Rafacz, F Pietluch, J Chilimoniuk, ... International journal of molecular sciences 21 (12), 4310, 2020 | 92 | 2020 |
| Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data K Sidorczuk, P Gagat, F Pietluch, J Kała, D Rafacz, L Bąkała, J Słowik, ... Briefings in Bioinformatics 23 (5), bbac343, 2022 | 52 | 2022 |
| Possible import routes of proteins into the cyanobacterial endosymbionts/plastids of Paulinella chromatophora P Mackiewicz, A Bodył, P Gagat Theory in Biosciences 131, 1-18, 2012 | 40 | 2012 |
| Organelle evolution: Paulinella breaks a paradigm A Bodył, P Mackiewicz, P Gagat Current Biology 22 (9), R304-R306, 2012 | 35 | 2012 |
| Monophyly of Archaeplastida supergroup and relationships among its lineages in the light of phylogenetic and phylogenomic studies. Are we close to a consensus? P Mackiewicz, P Gagat Acta Societatis Botanicorum Poloniae 83 (4), 2014 | 33 | 2014 |
| Tertiary plastid endosymbioses in dinoflagellates P Gagat, A Bodył, P Mackiewicz, JW Stiller Endosymbiosis, 233-290, 2014 | 32 | 2014 |
| PhyMet2: a database and toolkit for phylogenetic and metabolic analyses of methanogens B Michał, P Gagat, S Jabłoński, J Chilimoniuk, M Gaworski, P Mackiewicz, ... Environmental microbiology reports 10 (3), 378-382, 2018 | 31 | 2018 |
| Evolutionary history and phylogeographic relationships of shrews from Sorex araneus group P Mackiewicz, M Moska, H Wierzbicki, P Gagat, D Mackiewicz PLoS One 12 (6), e0179760, 2017 | 27 | 2017 |
| Cancergram: An effective classifier for differentiating anticancer from antimicrobial peptides M Burdukiewicz, K Sidorczuk, D Rafacz, F Pietluch, M Bąkała, J Słowik, ... Pharmaceutics 12 (11), 1045, 2020 | 25 | 2020 |
| Many alternative and theoretical genetic codes are more robust to amino acid replacements than the standard genetic code P Błażej, M Wnętrzak, D Mackiewicz, P Gagat, P Mackiewicz Journal of theoretical biology 464, 21-32, 2019 | 25 | 2019 |
| How protein targeting to primary plastids via the endomembrane system could have evolved? A new hypothesis based on phylogenetic studies P Gagat, A Bodył, P Mackiewicz Biology Direct 8, 1-22, 2013 | 25 | 2013 |
| Protein import into the photosynthetic organelles of Paulinella chromatophora and its implications for primary plastid endosymbiosis P Mackiewicz, A Bodył, P Gagat Symbiosis 58, 99-107, 2012 | 19 | 2012 |
| Prediction of signal peptides in proteins from malaria parasites M Burdukiewicz, P Sobczyk, J Chilimoniuk, P Gagat, P Mackiewicz International journal of molecular sciences 19 (12), 3709, 2018 | 18 | 2018 |
| Peculiarities within peculiarities–dinoflagellates and their mitochondrial genomes P Gagat, D Mackiewicz, P Mackiewicz Mitochondrial Dna Part B 2 (1), 191-195, 2017 | 15 | 2017 |
| Diversity of muskox Ovibos moschatus (Zimmerman, 1780) (Bovidae, Mammalia) in time and space based on cranial morphometry K Stefaniak, G Lipecki, A Nadachowski, A Semba, U Ratajczak, ... Historical Biology 33 (1), 62-77, 2021 | 14 | 2021 |
| Protein translocons in photosynthetic organelles of Paulinella chromatophora P Gagat, P Mackiewicz Acta Societatis Botanicorum Poloniae 83 (4), 2014 | 12 | 2014 |
| Identification of new in vivo phosphosites on lamin Dm - the evidence of heterogeneity of phosphorylation sites in different Drosophila tissues M Zaremba-Czogalla, P Gagat, K Kozioł, M Dubińska-Magiera, J Sikora, ... Nucleus 2 (5), 478-488, 2011 | 11 | 2011 |
| Endosymbiosis P Gagat, A Bodył, P Mackiewicz, JW Stiller, W Löffelhardt Springer, Vienna, 2014 | 8 | 2014 |
| Enhancing antimicrobial peptide activity through modifications of charge, hydrophobicity, and structure P Gagat, M Ostrówka, A Duda-Madej, P Mackiewicz International Journal of Molecular Sciences 25 (19), 10821, 2024 | 7 | 2024 |
| Cymbomonas tetramitiformis - a peculiar prasinophyte with a taste for bacteria sheds light on plastid evolution P Gagat, P Mackiewicz Symbiosis 71, 1-7, 2017 | 7 | 2017 |