B. Jayaram

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65 makale

24 makale

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Finansman sağlayan kuruluşun getirdiği zorunluluğa dayalı olarak

Katkıda bulunan yazarlar

Ashutosh ShandilyaGeorgia State University, ATL, USAgsu.edu üzerinde doğrulanmış e-posta adresine sahip
Dr Tanya SinghLMCB, UCLucl.ac.uk üzerinde doğrulanmış e-posta adresine sahip
Goutam MukherjeeHeidelberg Universityh-its.org üzerinde doğrulanmış e-posta adresine sahip
Aditya MittalProfessor of Biological Sciences, Indian Institute of Technology Delhibioschool.iitd.ac.in üzerinde doğrulanmış e-posta adresine sahip
Shashank ShekharIIT Delhiscfbio-iitd.res.in üzerinde doğrulanmış e-posta adresine sahip
Rahul KaushikBiotech Research Center, Technology Innovation Institute, Abu Dhabi, UAEtii.ae üzerinde doğrulanmış e-posta adresine sahip
Matthew A. YoungUniversity of Michiganumich.edu üzerinde doğrulanmış e-posta adresine sahip
James GomesProfessor, School of Biological Sciences, Indian Institute of Technology Delhi, Indiabioschool.iitd.ac.in üzerinde doğrulanmış e-posta adresine sahip
Nasimul HodaProfessor, Department of Chemistry, Jamai Millia Islamia, New Delhi-110025, India.jmi.ac.in üzerinde doğrulanmış e-posta adresine sahip
Barry HonigColumbia Universitycolumbia.edu üzerinde doğrulanmış e-posta adresine sahip
Dr. Aditya Kumar PadhiSchool of Biochemical Engineering, Indian Institute of Technology (BHU), Varanasi, Indiaiitbhu.ac.in üzerinde doğrulanmış e-posta adresine sahip
Avinash MishraIIT, Delhiiitd.ac.in üzerinde doğrulanmış e-posta adresine sahip
Priyanka DhingraPalatin Technologies;Envisagenics; Weill Cornell Medical College NY; Indian Institute of Technologypalatin.com üzerinde doğrulanmış e-posta adresine sahip
Pradeep PantAssistant Prof, Bennett University, Indiauni-due.de üzerinde doğrulanmış e-posta adresine sahip
kim sharpDept. of Biochemistry and BIophysics, University of Pennsylvaniaupenn.edu üzerinde doğrulanmış e-posta adresine sahip
Pooja NarangArizona State Universityasu.edu üzerinde doğrulanmış e-posta adresine sahip
Abhilash JayarajDana Farber Cancer Institute, Harvard Medical Schooldfci.harvard.edu üzerinde doğrulanmış e-posta adresine sahip
Richard LaveryIBCP, CNRS / University of Lyonibcp.fr üzerinde doğrulanmış e-posta adresine sahip
Ruchika BhatUniversity of Arizonaemail.arizona.edu üzerinde doğrulanmış e-posta adresine sahip
Priyanka SiwachProfessor, Biotechnology, CDLU Sirsacdlu.in üzerinde doğrulanmış e-posta adresine sahip

Takip et

B. Jayaram

Supercomputing Facility for Bioinformatics & Computational Biology, IIT Delhi

chemistry.iitd.ac.in üzerinde doğrulanmış e-posta adresine sahip - Ana Sayfa

Chemistry Computational Chemistry Molecular Bioinformatics Computer aided drug discovery


Başlık Alıntılara göre sırala Yıla göre sırala Başlığa göre sırala	Alıntı yapanlar Alıntı yapanlar	Yıl
Intrusion of counterions into the spine of hydration in the minor groove of B-DNA: fractional occupancy of electronegative pockets MA Young, B Jayaram, DL Beveridge Journal of the American Chemical Society 119 (1), 59-69, 1997	461	1997
The electrostatic potential of B‐DNA B Jayaram, KA Sharp, B Honig Biopolymers: Original Research on Biomolecules 28 (5), 975-993, 1989	359	1989
A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA R Lavery, K Zakrzewska, D Beveridge, TC Bishop, DA Case, ... Nucleic acids research 38 (1), 299-313, 2010	356	2010
Solvation free energy of biomacromolecules: Parameters for a modified generalized Born model consistent with the AMBER force field B Jayaram, D Sprous, DL Beveridge The Journal of Physical Chemistry B 102 (47), 9571-9576, 1998	338	1998
Sanjeevini: a freely accessible web-server for target directed lead molecule discovery B Jayaram, T Singh, G Mukherjee, A Mathur, S Shekhar, V Shekhar BMC bioinformatics 13, 1-13, 2012	256	2012
The role of water in protein-DNA recognition B Jayaram, T Jain Annu. Rev. Biophys. Biomol. Struct. 33 (1), 343-361, 2004	252	2004
Free energy analysis of the conformational preferences of A and B forms of DNA in solution B Jayaram, D Sprous, MA Young, DL Beveridge Journal of the American Chemical Society 120 (41), 10629-10633, 1998	232	1998
μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA M Pasi, JH Maddocks, D Beveridge, TC Bishop, DA Case, T Cheatham III, ... Nucleic acids research 42 (19), 12272-12283, 2014	227	2014
Free energy calculations of ion hydration: an analysis of the Born model in terms of microscopic simulations B Jayaram, R Fine, K Sharp, B Honig The Journal of Physical Chemistry 93 (10), 4320-4327, 1989	214	1989
AADS - An Automated Active Site Identification, Docking, and Scoring Protocol for Protein Targets Based on Physicochemical Descriptors T Singh, D Biswas, B Jayaram Journal of chemical information and modeling 51 (10), 2515-2527, 2011	205	2011
Do water molecules mediate protein-DNA recognition? CK Reddy, A Das, B Jayaram Journal of Molecular Biology 314 (3), 619-632, 2001	194	2001
Modeling DNA in aqueous solutions: theoretical and computer simulation studies on the ion atmosphere of DNA B Jayaram, DL Beveridge Annual review of biophysics and biomolecular structure 25 (1), 367-394, 1996	183	1996
Local dielectric environment of B-DNA in solution: results from a 14 ns molecular dynamics trajectory MA Young, B Jayaram, DL Beveridge The Journal of Physical Chemistry B 102 (39), 7666-7669, 1998	164	1998
Inhibiting fungal multidrug resistance by disrupting an activator-Mediator interaction JL Nishikawa, A Boeszoermenyi, LA Vale-Silva, R Torelli, B Posteraro, ... Nature 530, 485-489, 2016	161	2016
ParDOCK: an all atom energy based Monte Carlo docking protocol for protein-ligand complexes A Gupta, A Gandhimathi, P Sharma, B Jayaram Protein and peptide letters 14 (7), 632-646, 2007	161	2007
A molecular thermodynamic view of DNA–drug interactions: a case study of 25 minor-groove binders SA Shaikh, SR Ahmed, B Jayaram Archives of biochemistry and biophysics 429 (1), 81-99, 2004	160	2004
Free energy analysis of protein–DNA binding: the EcoRI endonuclease–DNA complex B Jayaram, KJ McConnell, SB Dixit, DL Beveridge Journal of Computational Physics 151 (1), 333-357, 1999	156	1999
A modification of the generalized Born theory for improved estimates of solvation energies and pK shifts B Jayaram, Y Liu, DL Beveridge The Journal of chemical physics 109 (4), 1465-1471, 1998	155	1998
A phenomenological model for predicting melting temperatures of DNA sequences G Khandelwal, J Bhyravabhotla PloS one 5 (8), e12433, 2010	151	2010
Bhageerath: an energy based web enabled computer software suite for limiting the search space of tertiary structures of small globular proteins B Jayaram, K Bhushan, SR Shenoy, P Narang, S Bose, P Agrawal, ... Nucleic acids research 34 (21), 6195-6204, 2006	146	2006

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