Parmbsc1: a refined force field for DNA simulations I Ivani, PD Dans, A Noy, A Pérez, I Faustino, A Hospital, J Walther, ... Nature methods 13 (1), 55-58, 2016 | 991 | 2016 |
MDWeb and MDMoby: an integrated web-based platform for molecular dynamics simulations A Hospital, P Andrio, C Fenollosa, D Cicin-Sain, M Orozco, JL Gelpí Bioinformatics 28 (9), 1278-1279, 2012 | 148 | 2012 |
BIGNASim: a NoSQL database structure and analysis portal for nucleic acids simulation data A Hospital, P Andrio, C Cugnasco, L Codo, Y Becerra, PD Dans, ... Nucleic acids research 44 (D1), D272-D278, 2016 | 55 | 2016 |
pyPcazip: A PCA-based toolkit for compression and analysis of molecular simulation data A Shkurti, R Goni, P Andrio, E Breitmoser, I Bethune, M Orozco, ... SoftwareX 5, 44-50, 2016 | 54 | 2016 |
Parmbsc: a refined force field for dna simulations I Ivani, PD Dans, A Noy, A Pérez, I Faustino, A Hospital, J Walther, ... Nature 201, 5, 2016 | 51 | 2016 |
BioExcel Building Blocks, a software library for interoperable biomolecular simulation workflows P Andrio, A Hospital, J Conejero, L Jordá, M Del Pino, L Codo, ... Scientific data 6 (1), 169, 2019 | 45 | 2019 |
BioExcel Building Blocks Workflows (BioBB-Wfs), an integrated web-based platform for biomolecular simulations G Bayarri, P Andrio, A Hospital, M Orozco, JL Gelpí Nucleic Acids Research 50 (W1), W99-W107, 2022 | 9 | 2022 |
Adam Hospital, Jürgen Walther, Pau Andrio, Ramon Goñi, Alexandra Balaceanu, Guillem Portella, Federica Battistini, Josep Lluis Gelpí, Carlos González, Michele Vendruscolo … I Ivani, PD Dans, A Noy, A Pérez, I Faustino Nature methods 13 (1), 55-58, 2015 | 9 | 2015 |
Hospital A, Conejero J, Jordá L, Del Pino M, Codo L P Andrio BioExcel building blocks, a software library for interoperable biomolecular …, 2019 | 7 | 2019 |
SEABED: Small molEcule activity scanner weB servicE baseD C Fenollosa, M Oton, P Andrio, J Cortes, M Orozco, JR Goni Bioinformatics 31 (5), 773-775, 2015 | 7 | 2015 |
Making canonical workflow building blocks interoperable across workflow languages S Soiland-Reyes, G Bayarri, P Andrio, R Long, D Lowe, A Niewielska, ... Data Intelligence 4 (2), 342-357, 2022 | 5 | 2022 |
Uso de algoritmos de aprendizaje automático aplicados a bases de datos genéticos R Gago Utrera Universitat Oberta de Catalunya, 2017 | 4 | 2017 |
Aprendiendo a programar. Nuevos retos, nuevas propuestas B Jiménez-García, C Pérez Solà, P Andrio Balado, MJ Marco-Galindo Asociación de Enseñantes Universitarios de la Informática (AENUI), 2019 | 3 | 2019 |
High-Throughput Prediction of the Impact of Genetic Variability on Drug Sensitivity and Resistance Patterns for Clinically Relevant Epidermal Growth Factor Receptor Mutations … A Suriñach, A Hospital, Y Westermaier, L Jordà, S Orozco-Ruiz, D Beltrán, ... Journal of Chemical Information and Modeling 63 (1), 321-334, 2022 | 1 | 2022 |
The BioExcel methodology for developing dynamic, scalable, reliable and portable computational biomolecular workflows J Ejarque, P Andrio, A Hospital, J Conejero, D Lezzi, JLL Gelpi, RM Badia 2022 IEEE 18th International Conference on e-Science (e-Science), 357-366, 2022 | 1 | 2022 |
Bioexcel building blocks test cases P Andrio, J Conejero, L Jordá, M Del Pino, L Codo, S Soiland-Reyes, ... | 1 | 2019 |
Uso de algoritmos de aprendizaje automático aplicados a base de datos genéticas S Navarro Jurado Universitat Oberta de Catalunya, 2016 | 1 | 2016 |
Uso de algoritmos de aprendizaje automático aplicados a bases de datos genéticos (HapMap) J Pulido Lozano Universitat Oberta de Catalunya, 2016 | 1 | 2016 |
Using interactive Jupyter Notebooks and BioConda for FAIR and reproducible biomolecular simulation workflows G Bayarri, P Andrio, JL Gelpí, A Hospital, M Orozco PLOS Computational Biology 20 (6), e1012173, 2024 | | 2024 |
BioExcel Building Blocks REST API (BioBB REST API), programmatic access to interoperable biomolecular simulation tools G Bayarri, P Andrio, A Hospital, M Orozco, JL Gelpí Bioinformatics 38 (12), 3302-3303, 2022 | | 2022 |