| A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ... Nature communications 5 (1), 4498, 2014 | 859 | 2014 |
| Critical assessment of metagenome interpretation—a benchmark of metagenomics software A Sczyrba, P Hofmann, P Belmann, D Koslicki, S Janssen, J Dröge, ... Nature methods 14 (11), 1063-1071, 2017 | 818 | 2017 |
| Lytic to temperate switching of viral communities B Knowles, CB Silveira, BA Bailey, K Barott, VA Cantu, ... Nature 531 (7595), 466-470, 2016 | 585 | 2016 |
| SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data GGZ Silva, KT Green, BE Dutilh, RA Edwards Bioinformatics 32 (3), 354-361, 2016 | 181 | 2016 |
| FOCUS: an alignment-free model to identify organisms in metagenomes using non-negative least squares GGZ Silva, DA Cuevas, BE Dutilh, RA Edwards PeerJ 2, e425, 2014 | 118 | 2014 |
| Combining de novo and reference-guided assembly with scaffold_builder GGZ Silva, BE Dutilh, TD Matthews, K Elkins, R Schmieder, EA Dinsdale, ... Source code for biology and medicine 8, 1-5, 2013 | 107 | 2013 |
| Metagenomic Analysis of Healthy and White Plague-Affected Mussismilia braziliensis Corals GD Garcia, GB Gregoracci, E de O. Santos, PM Meirelles, GGZ Silva, ... Microbial ecology 65, 1076-1086, 2013 | 104 | 2013 |
| Oxygen minimum zones harbour novel viral communities with low diversity N Cassman, A Prieto‐Davó, K Walsh, GGZ Silva, F Angly, S Akhter, ... Environmental microbiology 14 (11), 3043-3065, 2012 | 102 | 2012 |
| Transcriptomic analysis of the red seaweed Laurencia dendroidea (Florideophyceae, Rhodophyta) and its microbiome LS de Oliveira, GB Gregoracci, GGZ Silva, LT Salgado, GA Filho, ... BMC genomics 13, 1-13, 2012 | 100 | 2012 |
| Acidobacteria subgroups and their metabolic potential for carbon degradation in sugarcane soil amended with vinasse and nitrogen fertilizers MGA De Chaves, GGZ Silva, R Rossetto, RA Edwards, SM Tsai, ... Frontiers in microbiology 10, 1680, 2019 | 91 | 2019 |
| Taxonomic and functional microbial signatures of the endemic marine sponge Arenosclera brasiliensis AE Trindade-Silva, C Rua, GGZ Silva, BE Dutilh, APB Moreira, ... PLoS One 7 (7), e39905, 2012 | 79 | 2012 |
| Optimizing and evaluating the reconstruction of Metagenome-assembled microbial genomes B Papudeshi, JM Haggerty, M Doane, MM Morris, K Walsh, DT Beattie, ... BMC genomics 18, 1-13, 2017 | 71 | 2017 |
| Multi-analytical approach reveals potential microbial indicators in soil for sugarcane model systems AA Navarrete, TR Diniz, LPP Braga, GGZ Silva, JC Franchini, R Rossetto, ... PLoS One 10 (6), e0129765, 2015 | 64 | 2015 |
| Using Metagenomics to Connect Microbial Community Biodiversity and Functions GGZSSMT Lucas William Mendes, Lucas Peres Palma Braga, Acacio Aparecido ... Metagenomics: Current Advances and Emerging Concepts, 2017 | 63* | 2017 |
| Microbial community diversity and physical–chemical features of the Southwestern Atlantic Ocean N Alves Junior, PM Meirelles, E de Oliveira Santos, B Dutilh, GGZ Silva, ... Archives of microbiology 197, 165-179, 2015 | 56 | 2015 |
| Genomic Comparison of the Closely-Related Salmonella enterica Serovars Enteritidis, Dublin and Gallinarum TD Matthews, R Schmieder, GGZ Silva, J Busch, N Cassman, BE Dutilh, ... PloS one 10 (6), e0126883, 2015 | 54 | 2015 |
| Diel population and functional synchrony of microbial communities on coral reefs LW Kelly, CE Nelson, AF Haas, DS Naliboff, S Calhoun, CA Carlson, ... Nature communications 10 (1), 1691, 2019 | 48 | 2019 |
| A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes. Nat Commun 5: 4498 BE Dutilh, N Cassman, K McNair, SE Sanchez, GGZ Silva, L Boling, ... | 48 | 2014 |
| Genomic Taxonomy of the Genus Prochlorococcus CC Thompson, GGZ Silva, NM Vieira, R Edwards, ACP Vicente, ... Microbial ecology 66, 752-762, 2013 | 46 | 2013 |
| Polyketide synthase gene diversity within the microbiome of the sponge Arenosclera brasiliensis, endemic to the Southern Atlantic Ocean AE Trindade-Silva, CPJ Rua, BGN Andrade, ACP Vicente, GGZ Silva, ... Applied and environmental microbiology 79 (5), 1598-1605, 2013 | 43 | 2013 |
Rob EdwardsMatthew Flinders Fellow of Bioinformatics, Flinders University, Adelaide, SA, Australiaflinders.edu.au üzerinde doğrulanmış e-posta adresine sahip