| Microbiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline S Denman, J Doonan, E Ransom-Jones, M Broberg, S Plummer, S Kirk, ... The ISME journal 12 (2), 386-399, 2018 | 129 | 2018 |
| Integrated multi-omic analysis of host-microbiota interactions in acute oak decline M Broberg, J Doonan, F Mundt, S Denman, JE McDonald Microbiome 6, 1-15, 2018 | 74 | 2018 |
| Lignocellulose-degrading microbial communities in landfill sites represent a repository of unexplored biomass-degrading diversity E Ransom-Jones, AJ McCarthy, S Haldenby, J Doonan, JE McDonald Msphere 2 (4), 10.1128/msphere. 00300-17, 2017 | 66 | 2017 |
| Genomic analysis of bacteria in the Acute Oak Decline pathobiome J Doonan, S Denman, JA Pachebat, JE McDonald Microbial genomics 5 (1), e000240, 2019 | 59 | 2019 |
| Host–microbiota–insect interactions drive emergent virulence in a complex tree disease JM Doonan, M Broberg, S Denman, JE McDonald Proceedings of the Royal Society B 287 (1933), 20200956, 2020 | 34 | 2020 |
| Survival of Brenneria goodwinii and Gibbsiella quercinecans, associated with acute oak decline, in rainwater and forest soil BJ Pettifor, J Doonan, S Denman, JE McDonald Systematic and applied microbiology 43 (2), 126052, 2020 | 23 | 2020 |
| Brenneria goodwinii growth in vitro is improved by competitive interactions with other bacterial species associated with acute oak decline C Brady, M Orsi, JM Doonan, S Denman, D Arnold Current Research in Microbial Sciences 3, 100102, 2022 | 12 | 2022 |
| Extensive local-scale gene flow and long-term population stability in the intertidal mollusc Katharina tunicata (Mollusca: Polyplacophora) J Doonan, GE Beatty, JD Sigwart, J Provan Biological Journal of the Linnean Society 106 (3), 589-597, 2012 | 12 | 2012 |
| Shotgun Metagenomic Sequencing Analysis of Soft-Rot Enterobacteriaceae in Polymicrobial Communities J Doonan, S Denman, JE McDonald, PN Golyshin Metagenomics: methods and protocols, 85-97, 2017 | 9 | 2017 |
| Gibbsiella quercinecans as new pathogen involved in bacterial canker of Russian olive E Basavand, P Khodaygan, JM Doonan, H Rahimian 3 Biotech 11 (6), 286, 2021 | 8 | 2021 |
| Multiple, Single Trait GWAS and Supervised Machine Learning Reveal the Genetic Architecture of Fraxinus excelsior Tolerance to Ash Dieback in Europe JM Doonan, KB Budde, C Kosawang, A Lobo, R Verbylaite, JC Brealey, ... Plant, Cell & Environment, 2025 | 5 | 2025 |
| Factors that shape the host microbiome M Sze, J Doonan, JE McDonald, RN Harris, M Dewar Microbiomes of soils, plants and animals, 55-57, 2020 | 5 | 2020 |
| The intergenic transcribed spacer region 1 as a molecular marker for identification and discrimination of Enterobacteriaceae associated with acute oak decline J Doonan, S Denman, C Gertler, JA Pachebat, PN Golyshin, JE McDonald Journal of Applied Microbiology 118 (1), 193-201, 2015 | 5 | 2015 |
| First report of bacterial canker of fig trees caused by Brenneria nigrifluens E Basavand, P Khodaygan, H Rahimian, JM Doonan, A Pakdin‐Parizi Journal of Phytopathology 169 (7-8), 429-437, 2021 | 4 | 2021 |
| Genomic analysis of bacterial species associated with acute oak decline J Doonan PQDT-UK & Ireland, 2016 | 4 | 2016 |
| Integrated multi-omic analysis of host-microbiota interactions in acute oak decline. Microbiome. 2018; 6: 21 M Broberg, J Doonan, F Mundt, S Denman, JE McDonald | 3 | |
| Chemical cues from beetle larvae trigger proliferation and putative virulence gene expression of a plant pathogen MC Cambon, G Thomas, J Caulfield, M Crampton, K Reed, JM Doonan, ... BioRxiv, 2023.11. 21.568124, 2023 | 2 | 2023 |
| Host microbiomes and disease JE McDonald, RN Harris, J Doonan, S Carryl, M Sze, V McKenzie, ... Microbiomes of soils, plants and animals: an integrated approach, 122-153, 2020 | 2 | 2020 |
| Transcriptome profiling of Fraxinus excelsior genotypes infested by emerald ash borer JM Doonan, C Kosawang, M Eisenring, T Ladd, AD Roe, KB Budde, ... Scientific Data 10 (1), 680, 2023 | 1 | 2023 |
| Limitations to fungal diversity in forest soil during secondary succession JM Doonan Ecography, e07473, 2024 | | 2024 |
