Підписатись
Richard Bonneau
Richard Bonneau
Інші іменаRichard A Bonneau, Rich Bonneau
Genentech
Підтверджена електронна адреса в gene.com - Домашня сторінка
Назва
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Посилання
Рік
Tweeting from left to right: Is online political communication more than an echo chamber?
P Barberá, JT Jost, J Nagler, JA Tucker, R Bonneau
Psychological science 26 (10), 1531-1542, 2015
23212015
Wisdom of crowds for robust gene network inference
D Marbach, JC Costello, R Küffner, NM Vega, RJ Prill, DM Camacho, ...
Nature methods 9 (8), 796-804, 2012
19212012
The Rosetta all-atom energy function for macromolecular modeling and design
RF Alford, A Leaver-Fay, JR Jeliazkov, MJ O’Meara, FP DiMaio, H Park, ...
Journal of chemical theory and computation 13 (6), 3031-3048, 2017
14982017
Sparse and compositionally robust inference of microbial ecological networks
ZD Kurtz, CL Müller, ER Miraldi, DR Littman, MJ Blaser, RA Bonneau
PLoS computational biology 11 (5), e1004226, 2015
14562015
The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts
AG Baltz, M Munschauer, B Schwanhäusser, A Vasile, Y Murakawa, ...
Molecular cell 46 (5), 674-690, 2012
13852012
A validated regulatory network for Th17 cell specification
M Ciofani, A Madar, C Galan, ML Sellars, K Mace, F Pauli, A Agarwal, ...
Cell 151 (2), 289-303, 2012
13342012
High-definition spatial transcriptomics for in situ tissue profiling
S Vickovic, G Eraslan, F Salmén, J Klughammer, L Stenbeck, D Schapiro, ...
Nature methods 16 (10), 987-990, 2019
10152019
Innate immune detection of the type III secretion apparatus through the NLRC4 inflammasome
EA Miao, DP Mao, N Yudkovsky, R Bonneau, CG Lorang, SE Warren, ...
Proceedings of the National Academy of Sciences 107 (7), 3076-3080, 2010
9352010
Structure-based protein function prediction using graph convolutional networks
V Gligorijević, PD Renfrew, T Kosciolek, JK Leman, D Berenberg, ...
Nature communications 12 (1), 3168, 2021
7742021
Ab initio protein structure prediction of CASP III targets using ROSETTA
KT Simons, R Bonneau, I Ruczinski, D Baker
Proteins: Structure, Function, and Bioinformatics 37 (S3), 171-176, 1999
7691999
Macromolecular modeling and design in Rosetta: recent methods and frameworks
JK Leman, BD Weitzner, SM Lewis, J Adolf-Bryfogle, N Alam, RF Alford, ...
Nature methods 17 (7), 665-680, 2020
7362020
The Inferelator: an algorithm for learning parsimonious regulatory networks from systems-biology data sets de novo
R Bonneau, DJ Reiss, P Shannon, M Facciotti, L Hood, NS Baliga, ...
Genome biology 7, 1-16, 2006
6852006
Why are there hotspot mutations in the TP53 gene in human cancers?
EH Baugh, H Ke, AJ Levine, RA Bonneau, CS Chan
Cell Death & Differentiation 25 (1), 154-160, 2018
6482018
How social media facilitates political protest: Information, motivation, and social networks
JT Jost, P Barberá, R Bonneau, M Langer, M Metzger, J Nagler, J Sterling, ...
Political psychology 39, 85-118, 2018
6282018
An IL-23R/IL-22 circuit regulates epithelial serum amyloid A to promote local effector Th17 responses
T Sano, W Huang, JA Hall, Y Yang, A Chen, SJ Gavzy, JY Lee, JW Ziel, ...
Cell 163 (2), 381-393, 2015
6072015
Who leads? Who follows? Measuring issue attention and agenda setting by legislators and the mass public using social media data
P Barberá, A Casas, J Nagler, PJ Egan, R Bonneau, JT Jost, JA Tucker
American Political Science Review 113 (4), 883-901, 2019
5292019
c-MAF-dependent regulatory T cells mediate immunological tolerance to a gut pathobiont
M Xu, M Pokrovskii, Y Ding, R Yi, C Au, OJ Harrison, C Galan, Y Belkaid, ...
Nature 554 (7692), 373-377, 2018
4842018
Serverification of molecular modeling applications: the Rosetta Online Server that Includes Everyone (ROSIE)
S Lyskov, FC Chou, SO Conchuir, BS Der, K Drew, D Kuroda, J Xu, ...
PloS one 8 (5), e63906, 2013
4602013
Ab initio protein structure prediction: progress and prospects
R Bonneau, D Baker
Annual review of biophysics and biomolecular structure 30 (1), 173-189, 2001
4522001
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Y Jiang, TR Oron, WT Clark, AR Bankapur, D D’Andrea, R Lepore, ...
Genome biology 17, 1-19, 2016
4492016
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