| Comprehensive integration of single-cell data T Stuart, A Butler, P Hoffman, C Hafemeister, E Papalexi, WM Mauck, ... cell 177 (7), 1888-1902. e21, 2019 | 12757 | 2019 |
| Integrating single-cell transcriptomic data across different conditions, technologies, and species A Butler, P Hoffman, P Smibert, E Papalexi, R Satija Nature biotechnology 36 (5), 411-420, 2018 | 10424 | 2018 |
| Integrated analysis of multimodal single-cell data Y Hao, S Hao, E Andersen-Nissen, WM Mauck, S Zheng, A Butler, MJ Lee, ... Cell 184 (13), 3573-3587. e29, 2021 | 10193 | 2021 |
| Single-cell RNA sequencing to explore immune cell heterogeneity E Papalexi, R Satija Nature Reviews Immunology 18 (1), 35-45, 2018 | 1506 | 2018 |
| Multiplexed detection of proteins, transcriptomes, clonotypes and CRISPR perturbations in single cells EP Mimitou, A Cheng, A Montalbano, S Hao, M Stoeckius, M Legut, ... Nature methods 16 (5), 409-412, 2019 | 476 | 2019 |
| Loss of BAP1 function leads to EZH2-dependent transformation LM LaFave, W Béguelin, R Koche, M Teater, B Spitzer, A Chramiec, ... Nature medicine 21 (11), 1344-1349, 2015 | 388 | 2015 |
| Scalable, multimodal profiling of chromatin accessibility, gene expression and protein levels in single cells EP Mimitou, CA Lareau, KY Chen, AL Zorzetto-Fernandes, Y Hao, ... Nature biotechnology 39 (10), 1246-1258, 2021 | 372 | 2021 |
| JAK–STAT pathway activation in malignant and nonmalignant cells contributes to MPN pathogenesis and therapeutic response M Kleppe, M Kwak, P Koppikar, M Riester, M Keller, L Bastian, T Hricik, ... Cancer discovery 5 (3), 316-331, 2015 | 328* | 2015 |
| Dual targeting of oncogenic activation and inflammatory signaling increases therapeutic efficacy in myeloproliferative neoplasms M Kleppe, R Koche, L Zou, P van Galen, CE Hill, L Dong, S De Groote, ... Cancer cell 33 (1), 29-43. e7, 2018 | 300 | 2018 |
| Dose-dependent role of the cohesin complex in normal and malignant hematopoiesis AD Viny, CJ Ott, B Spitzer, M Rivas, C Meydan, E Papalexi, D Yelin, ... Journal of Experimental Medicine 212 (11), 1819-1832, 2015 | 165 | 2015 |
| Molecular transitions in early progenitors during human cord blood hematopoiesis S Zheng, E Papalexi, A Butler, W Stephenson, R Satija Molecular systems biology 14 (3), e8041, 2018 | 161 | 2018 |
| Characterizing the molecular regulation of inhibitory immune checkpoints with multimodal single-cell screens E Papalexi, EP Mimitou, AW Butler, S Foster, B Bracken, WM Mauck III, ... Nature genetics 53 (3), 322-331, 2021 | 157 | 2021 |
| Jak1 integrates cytokine sensing to regulate hematopoietic stem cell function and stress hematopoiesis M Kleppe, MH Spitzer, S Li, CE Hill, L Dong, E Papalexi, S De Groote, ... Cell stem cell 21 (4), 489-501. e7, 2017 | 87 | 2017 |
| Kinetics of adult hematopoietic stem cell differentiation in vivo S Upadhaya, CM Sawai, E Papalexi, A Rashidfarrokhi, G Jang, ... Journal of Experimental Medicine 215 (11), 2815-2832, 2018 | 86 | 2018 |
| JAK2/IDH-mutant–driven myeloproliferative neoplasm is sensitive to combined targeted inhibition AS McKenney, AN Lau, AVH Somasundara, B Spitzer, AM Intlekofer, ... The Journal of clinical investigation 128 (2), 789-804, 2018 | 82 | 2018 |
| Mauck 3rd T Stuart, A Butler, P Hoffman, C Hafemeister, E Papalexi WM, Hao, Y., Stoeckius, M., Smibert, P., Satija, 1888-1902, 0 | 65 | |
| Efficient combinatorial targeting of RNA transcripts in single cells with Cas13 RNA Perturb-seq HH Wessels, A Méndez-Mancilla, Y Hao, E Papalexi, WM Mauck III, L Lu, ... Nature methods 20 (1), 86-94, 2023 | 53 | 2023 |
| A latent subset of human hematopoietic stem cells resists regenerative stress to preserve stemness KB Kaufmann, AGX Zeng, E Coyaud, L Garcia-Prat, E Papalexi, ... Nature immunology 22 (6), 723-734, 2021 | 48 | 2021 |
| Tumor-specific HSP90 inhibition as a therapeutic approach in JAK-mutant acute lymphoblastic leukemias N Kucine, S Marubayashi, N Bhagwat, E Papalexi, P Koppikar, ... Blood, The Journal of the American Society of Hematology 126 (22), 2479-2483, 2015 | 45 | 2015 |
| High sensitivity single cell RNA sequencing with split pool barcoding V Tran, E Papalexi, S Schroeder, G Kim, A Sapre, J Pangallo, A Sova, ... Biorxiv, 2022.08. 27.505512, 2022 | 22 | 2022 |
