Підписатись
Eva Smorodina
Eva Smorodina
PhD Research Fellow, Laboratory for Computational and Systems Immunology, University of Oslo
Підтверджена електронна адреса в medisin.uio.no - Домашня сторінка
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Посилання
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Protein design: From the aspect of water solubility and stability
R Qing, S Hao, E Smorodina, D Jin, A Zalevsky, S Zhang
Chemical Reviews 122 (18), 14085-14179, 2022
1332022
Progress and challenges for the machine learning-based design of fit-for-purpose monoclonal antibodies
R Akbar, H Bashour, P Rawat, PA Robert, E Smorodina, TS Cotet, ...
MAbs 14 (1), 2008790, 2022
94*2022
Unconstrained generation of synthetic antibody–antigen structures to guide machine learning methodology for antibody specificity prediction
PA Robert, R Akbar, R Frank, M Pavlović, M Widrich, I Snapkov, ...
Nature Computational Science 2 (12), 845-865, 2022
502022
Toward real-world automated antibody design with combinatorial Bayesian optimization
A Khan, AI Cowen-Rivers, A Grosnit, PA Robert, V Greiff, E Smorodina, ...
Cell Reports Methods 3 (1), 2023
412023
One billion synthetic 3D-antibody-antigen complexes enable unconstrained machine-learning formalized investigation of antibody specificity prediction
PA Robert, R Akbar, R Frank, M Pavlović, M Widrich, I Snapkov, ...
BioRXiV, 2021.07. 06.451258, 2021
262021
Antbo: Towards real-world automated antibody design with combinatorial bayesian optimisation
A Khan, AI Cowen-Rivers, A Grosnit, DGX Deik, PA Robert, V Greiff, ...
arXiv preprint arXiv:2201.12570, 2022
222022
Comparing native crystal structures and AlphaFold2 predicted water-soluble G protein-coupled receptor QTY variants
MA Skuhersky, F Tao, R Qing, E Smorodina, D Jin, S Zhang
Life 11 (12), 1285, 2021
222021
Scalable biomimetic sensing system with membrane receptor dual-monolayer probe and graphene transistor arrays
R Qing, M Xue, J Zhao, L Wu, A Breitwieser, E Smorodina, T Schubert, ...
Science Advances 9 (29), eadf1402, 2023
212023
Comparing 2 crystal structures and 12 AlphaFold2-predicted human membrane glucose transporters and their water-soluble QTY variants
E Smorodina, F Tao, R Qing, D Jin, S Yang, S Zhang
QRB Discovery, 1-26, 2022
212022
Structural informatic study of determined and AlphaFold2 predicted molecular structures of 13 human solute carrier transporters and their water-soluble QTY variants
E Smorodina, I Diankin, F Tao, R Qing, S Yang, S Zhang
Scientific reports 12 (1), 20103, 2022
142022
Biophysical cartography of the native and human-engineered antibody landscapes quantifies the plasticity of antibody developability
H Bashour, E Smorodina, M Pariset, J Zhong, R Akbar, M Chernigovskaya, ...
Communications Biology 7 (1), 922, 2024
102024
Structural bioinformatics studies of glutamate transporters and their AlphaFold2 predicted water-soluble QTY variants and uncovering the natural mutations of L-> Q, I-> T, F …
A Karagöl, T Karagöl, E Smorodina, S Zhang
Plos one 19 (4), e0289644, 2024
62024
Experimental validation of immunogenic SARS-CoV-2 T cell epitopes identified by artificial intelligence
L Federico, B Malone, S Tennøe, V Chaban, JR Osen, M Gainullin, ...
Frontiers in Immunology 14, 1265044, 2023
62023
Development of a high-affinity antibody against the tumor-specific and hyperactive 611-p95HER2 isoform
E Dorraji, E Borgen, D Segura-Peña, P Rawat, E Smorodina, C Dunn, ...
Cancers 14 (19), 4859, 2022
62022
Structural bioinformatics studies of six human ABC transporters and their AlphaFold2-predicted water-soluble QTY variants
E Pan, F Tao, E Smorodina, S Zhang
QRB discovery 5, e1, 2024
52024
Effects of ion type and concentration on the structure and aggregation of the amyloid peptide Aβ16−22
E Smorodina, B Kav, H Fatafta, B Strodel
Proteins: Structure, Function, and Bioinformatics, 2023
52023
Structural bioinformatics studies of bacterial outer membrane beta-barrel transporters and their AlphaFold2 predicted water-soluble QTY variants
A Sajeev-Sheeja, E Smorodina, S Zhang
PLoS One 18 (8), e0290360, 2023
42023
Assessing AF2's ability to predict structural ensembles of proteins
JR Riccabona, FC Spoendlin, ALM Fischer, JR Loeffler, PK Quoika, ...
bioRxiv, 2024.04. 16.589792, 2024
22024
Computational engineering of water-soluble human potassium ion channels through QTY transformation
E Smorodina, F Tao, R Qing, S Yang, S Zhang
Scientific Reports 14 (1), 28159, 2024
12024
Computational Biophysical Analyses of Antibody Structure-Function Relationships with Emphasis on Therapeutic Antibody-Based Biologics
P Rawat, E Smorodina, D Sharma, R Prabakaran, J Wade, R Akbar, ...
Biopharmaceutical Informatics, 161-200, 2025
2025
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