| Conserved pan-cancer microenvironment subtypes predict response to immunotherapy A Bagaev, N Kotlov, K Nomie, V Svekolkin, A Gafurov, O Isaeva, N Osokin, ... Cancer cell 39 (6), 845-865. e7, 2021 | 819 | 2021 |
| Clinical and biological subtypes of B-cell lymphoma revealed by microenvironmental signatures N Kotlov, A Bagaev, MV Revuelta, JM Phillip, MT Cacciapuoti, ... Cancer discovery 11 (6), 1468-1489, 2021 | 182 | 2021 |
| Precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes A Zaitsev, M Chelushkin, D Dyikanov, I Cheremushkin, B Shpak, K Nomie, ... Cancer Cell 40 (8), 879-894. e16, 2022 | 86 | 2022 |
| Neoantigen vaccination induces clinical and immunologic responses in non-small cell lung cancer patients harboring EGFR mutations F Li, L Deng, KR Jackson, AH Talukder, AS Katailiha, SD Bradley, Q Zou, ... Journal for immunotherapy of cancer 9 (7), e002531, 2021 | 50 | 2021 |
| Single-cell spatial proteomic revelations on the multiparametric MRI heterogeneity of clinically significant prostate cancer RK Pachynski, EH Kim, N Miheecheva, N Kotlov, A Ramachandran, ... Clinical Cancer Research 27 (12), 3478-3490, 2021 | 24 | 2021 |
| Multi-omic profiling of follicular lymphoma reveals changes in tissue architecture and enhanced stromal remodeling in high-risk patients AJ Radtke, E Postovalova, A Varlamova, A Bagaev, M Sorokina, ... Cancer Cell 42 (3), 444-463. e10, 2024 | 18 | 2024 |
| Spatial mapping of human hematopoiesis at single-cell resolution reveals aging-associated topographic remodeling A Sarachakov, A Varlamova, V Svekolkin, M Polyakova, I Valencia, ... Blood 142 (26), 2282-2295, 2023 | 16 | 2023 |
| Multiregional single-cell proteogenomic analysis of ccRCC reveals cytokine drivers of intratumor spatial heterogeneity N Miheecheva, E Postovalova, Y Lyu, A Ramachandran, A Bagaev, ... Cell Reports 40 (7), 2022 | 15 | 2022 |
| A multi-scale, multiomic atlas of human normal and follicular lymphoma lymph nodes AJ Radtke, E Postovalova, A Varlamova, A Bagaev, M Sorokina, ... BioRxiv, 2022.06. 03.494716, 2022 | 14 | 2022 |
| Clinical and biological subtypes of B-cell lymphoma revealed by microenvironmental signatures. Cancer Discov 2021 N Kotlov, A Bagaev, MV Revuelta, JM Phillip, MT Cacciapuoti, ... Online ahead of Print.[CrossRef][PubMed], 0 | 9 | |
| Microenvironmental signatures reveal biological subtypes of diffuse large B-cell lymphoma (DLBCL) distinct from tumor cell molecular profiling L Cerchietti, G Inghirami, N Kotlov, V Svekolkin, A Bagaev, F Frenkel, ... Blood 134, 656, 2019 | 7 | 2019 |
| Techniques for determining tissue characteristics using multiplexed immunofluorescence imaging V Svekolkin, I Galkin, E Postovalova, R Ataullakhanov, A Bagaev, ... US Patent 11,250,568, 2022 | 4 | 2022 |
| The role of EGFR inhibitor (EGFRi) in immune cell infiltration and CD8+ T-cell activation in EGFR mutant lung cancer F Li, G Lizee, P Hwu, X Du, L Deng, A Talukder, A Katailiha, Q Zou, ... Annals of Oncology 30, v2, 2019 | 3 | 2019 |
| A digital imaging analysis (DIA) platform for identifying tertiary lymphoid structures (TLS) in lung adenocarcinoma (LUAD). V Kushnarev, A Belozerova, D Dymov, Y Popov, N Lukashevich, I Valiev, ... Journal of Clinical Oncology 40 (16_suppl), 3142-3142, 2022 | 2 | 2022 |
| A clinical AI-driven multiplex immunofluorescence imaging pipeline to characterize tumor microenvironment heterogeneity. D Zarubin, V Belotskiy, Z Xiang, A Varlamova, P Ovcharov, I Galkin, ... Journal of Clinical Oncology 40 (16_suppl), 3020-3020, 2022 | 2 | 2022 |
| Analysis of Primary Liquid Chromatography Mass Spectrometry Data by Neural Networks for Plant Samples Classification P Turova, A Stavrianidi, V Svekolkin, D Lyskov, I Podolskiy, I Rodin, ... Metabolites 12 (10), 993, 2022 | 1 | 2022 |
| Immune-depleted tumor microenvironment signature is associated with BTK inhibitor resistance in mantle cell lymphoma P Jain, K Nomie, V Segodin, E Egorov, Y Yao, L Navsaria, H Hill, N Kotlov, ... Blood 138, 1321, 2021 | 1 | 2021 |
| Integrated single-cell spatial multi-omics of intratumor heterogeneity in renal cell carcinoma. JJ Hsieh, N Miheecheva, A Ramachandran, Y Lyu, I Galkin, V Svekolkin, ... Journal of Clinical Oncology 38 (15_suppl), e17106-e17106, 2020 | 1 | 2020 |
| Multi-omics analysis of mantle cell lymphoma reveals an immune-cold tumor microenvironment associated with ibrutinib resistance. K Nomie, P Jain, N Kotlov, V Segodin, Q Cai, Y Liu, L Navsaria, ... Journal of Clinical Oncology 38 (15_suppl), 8055-8055, 2020 | 1 | 2020 |
| Tumor Microenvironment Molecular Signatures That Define Therapeutic Resistance in Mantle Cell Lymphoma K Nomie, N Kotlov, V Svekolkin, A Bagaev, Q Cai, J Falahat, O Moghrabi, ... Blood 134, 2762, 2019 | 1 | 2019 |
