| Towards provably secure asymmetric image encryption schemes NA Azam, J Zhu, U Hayat, A Shurbevski Information Sciences 631, 164-184, 2023 | 29 | 2023 |
| An inverse QSAR method based on a two-layered model and integer programming Y Shi, J Zhu, NA Azam, K Haraguchi, L Zhao, H Nagamochi, T Akutsu International journal of molecular sciences 22 (6), 2847, 2021 | 15 | 2021 |
| A novel method for inference of chemical compounds of cycle index two with desired properties based on artificial neural networks and integer programming J Zhu, C Wang, A Shurbevski, H Nagamochi, T Akutsu Algorithms 13 (5), 124, 2020 | 15 | 2020 |
| A novel method for inference of acyclic chemical compounds with bounded branch-height based on artificial neural networks and integer programming NA Azam, J Zhu, Y Sun, Y Shi, A Shurbevski, L Zhao, H Nagamochi, ... Algorithms for Molecular Biology 16 (1), 18, 2021 | 14 | 2021 |
| A novel method for inferring chemical compounds with prescribed topological substructures based on integer programming J Zhu, NA Azam, F Zhang, A Shurbevski, K Haraguchi, L Zhao, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics 19 (6 …, 2021 | 10 | 2021 |
| A new integer linear programming formulation to the inverse QSAR/QSPR for acyclic chemical compounds using skeleton trees F Zhang, J Zhu, R Chiewvanichakorn, A Shurbevski, H Nagamochi, ... International Conference on Industrial, Engineering and Other Applications …, 2020 | 10 | 2020 |
| A method for molecular design based on linear regression and integer programming J Zhu, NA Azam, K Haraguchi, L Zhao, H Nagamochi, T Akutsu Proceedings of the 2022 12th international conference on bioscience …, 2022 | 9 | 2022 |
| An inverse QSAR method based on decision tree and integer programming K Tanaka, J Zhu, NA Azam, K Haraguchi, L Zhao, H Nagamochi, T Akutsu International Conference on Intelligent Computing, 628-644, 2021 | 7 | 2021 |
| A method for inferring polymers based on linear regression and integer programming R Ido, S Cao, J Zhu, NA Azam, K Haraguchi, L Zhao, H Nagamochi, ... IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2024 | 6 | 2024 |
| Molecular design based on artificial neural networks, integer programming and grid neighbor search NA Azam, J Zhu, K Haraguchi, L Zhao, H Nagamochi, T Akutsu 2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2021 | 6 | 2021 |
| Molecular design based on integer programming and quadratic descriptors in a two-layered model J Zhu, NA Azam, S Cao, R Ido, K Haraguchi, L Zhao, H Nagamochi, ... arXiv preprint arXiv:2209.13527, 2022 | 4 | 2022 |
| A new approach to the design of acyclic chemical compounds using skeleton trees and integer linear programming F Zhang, J Zhu, R Chiewvanichakorn, A Shurbevski, H Nagamochi, ... Applied Intelligence 52 (15), 17058-17072, 2022 | 3 | 2022 |
| Adjustive Linear Regression and Its Application to the Inverse QSAR. J Zhu, K Haraguchi, H Nagamochi, T Akutsu BIOINFORMATICS, 144-151, 2022 | 3 | 2022 |
| An inverse QSAR method based on linear regression and integer programming J Zhu, NA Azam, K Haraguchi, L Zhao, H Nagamochi, T Akutsu arXiv preprint arXiv:2107.02381, 2021 | 2 | 2021 |
| An improved integer programming formulation for inferring chemical compounds with prescribed topological structures J Zhu, NA Azam, K Haraguchi, L Zhao, H Nagamochi, T Akutsu Advances and Trends in Artificial Intelligence. Artificial Intelligence …, 2021 | 2 | 2021 |
| Data mining method of single-cell omics data to evaluate a pure tissue environmental effect on gene expression level D Okada, J Zhu, K Shota, Y Nishimura, K Haraguchi arXiv preprint arXiv:2406.06969, 2024 | 1 | 2024 |
| Novel Methods for Chemical Compound Inference Based on Machine Learning and Mixed Integer Linear Programming J Zhu Kyoto University, 2023 | 1 | 2023 |
| Quadratic descriptors and reduction methods in a two-layered model for compound inference J Zhu, NA Azam, S Cao, R Ido, K Haraguchi, L Zhao, H Nagamochi, ... Frontiers in Genetics 15, 1483490, 2025 | | 2025 |
| Cycle-configuration: A novel graph-theoretic descriptor set for molecular inference B Song, J Zhu, NA Azam, K Haraguchi, L Zhao, T Akutsu 2024 IEEE International Conference on Bioinformatics and Biomedicine (BIBM …, 2024 | | 2024 |
| A Unified Approach to Inferring Chemical Compounds with the Desired Aqueous Solubility M Batool, NA Azam, J Zhu, K Haraguchi, L Zhao, T Akutsu arXiv preprint arXiv:2409.04301, 2024 | | 2024 |
