| GenMAPP, a new tool for viewing and analyzing microarray data on biological pathways KD Dahlquist, N Salomonis, K Vranizan, SC Lawlor, BR Conklin Nature genetics 31 (1), 19-20, 2002 | 1180 | 2002 |
| MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data SW Doniger, N Salomonis, KD Dahlquist, K Vranizan, SC Lawlor, ... Genome biology 4, 1-12, 2003 | 1124 | 2003 |
| The BioPAX community standard for pathway data sharing E Demir, MP Cary, S Paley, K Fukuda, C Lemer, I Vastrik, G Wu, ... Nature biotechnology 28 (9), 935-942, 2010 | 817 | 2010 |
| RNA sequence determinants for aminoglycoside binding to an A-site rRNA model oligonucleotide MI Recht, D Fourmy, SC Blanchard, KD Dahlquist, JD Puglisi Journal of molecular biology 262 (4), 421-436, 1996 | 338 | 1996 |
| GenMAPP 2: new features and resources for pathway analysis N Salomonis, K Hanspers, AC Zambon, K Vranizan, SC Lawlor, ... BMC bioinformatics 8, 1-12, 2007 | 333 | 2007 |
| Regression approaches for microarray data analysis MR Segal, KD Dahlquist, BR Conklin Journal of Computational Biology 10 (6), 961-980, 2003 | 281 | 2003 |
| Effect of mutations in the A site of 16 S rRNA on aminoglycoside antibiotic-ribosome interaction MI Recht, S Douthwaite, KD Dahlquist, JD Puglisi Journal of molecular biology 286 (1), 33-43, 1999 | 146 | 1999 |
| Interaction of translation initiation factor IF1 with the E. coli ribosomal A site KD Dahlquist, JD Puglisi Journal of molecular biology 299 (1), 1-15, 2000 | 128 | 2000 |
| Aminoglycoside antibiotics and decoding JD Puglisi, SC Blanchard, KD Dahlquist, RG Eason, D Fourmy, SR Lynch, ... The ribosome: Structure, function, antibiotics, and cellular interactions …, 2000 | 40 | 2000 |
| A “rule-of-five” framework for models and modeling to unify mathematicians and biologists and improve student learning C Diaz Eaton, HC Highlander, KD Dahlquist, G Ledder, MD LaMar, ... Primus 29 (8), 799-829, 2019 | 37 | 2019 |
| Using Gen MAPP and MAPPFinder to View Microarray Data on Biological Pathways and Identify Global Trends in the Data KD Dahlquist Current Protocols in Bioinformatics 5 (1), 7.5. 1-7.5. 26, 2004 | 25 | 2004 |
| Improving the computer science in bioinformatics through open source pedagogy JDN Dionisio, KD Dahlquist ACM SIGCSE Bulletin 40 (2), 115-119, 2008 | 13 | 2008 |
| Parameter Estimation for Gene Regulatory Networks from Microarray Data: Cold Shock Response in Saccharomyces cerevisiae KD Dahlquist, BG Fitzpatrick, ET Camacho, SD Entzminger, NC Wanner Bulletin of mathematical biology 77, 1457-1492, 2015 | 12 | 2015 |
| Microarray annotation and biological information on function B Brors Methods of information in medicine 44 (03), 468-472, 2005 | 10 | 2005 |
| The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions JD Puglisi, SC Blanchard, KD Dahlquist, RG Eason, D Fourmy, SR Lynch, ... Garrett, RA, 419-429, 2000 | 8 | 2000 |
| Investigating the structure and function of translation initiation factor 1 in Escherichia coli K Dahlquist, JD Puglisi Nucleic acids symposium series, 170-171, 1995 | 6 | 1995 |
| GRNsight: a web application and service for visualizing models of small-to medium-scale gene regulatory networks KD Dahlquist, JDN Dionisio, BG Fitzpatrick, NA Anguiano, A Varshneya, ... PeerJ Computer Science 2, e85, 2016 | 5 | 2016 |
| An invitation to modeling: building a community with shared explicit practices KD Dahlquist, ML Aikens, JT Dauer, SS Donovan, CD Eaton, ... PeerJ Preprints 5, e3215v1, 2017 | 4 | 2017 |
| GRNmap and GRNsight: open source software for dynamical systems modeling and visualization of medium-scale gene regulatory networks [v1; not peer reviewed] KD Dahlquist, BG Fitzpatrick, JDN Dionisio, NA Anguiano, JS Carrillo, ... F1000Research 5 (ISCB Comm J), 1618, 2016 | 3 | 2016 |
| Candidate genes for chromosomes 6 and 10 quantitative trait loci for age-related retinal degeneration in mice DG Ogando, KD Dahlquist, M Alizadeh, K Kunchithapautham, J Li, N Yu, ... Molecular Vision 16, 1004, 2010 | 2 | 2010 |
