Підписатись
Jakub Galgonek
Jakub Galgonek
Institute of Organic Chemistry and Biochemistry, Academy of Sciences of the Czech Republic
Підтверджена електронна адреса в uochb.cas.cz
Назва
Посилання
Посилання
Рік
The LOTUS initiative for open knowledge management in natural products research
A Rutz, M Sorokina, J Galgonek, D Mietchen, E Willighagen, A Gaudry, ...
elife 11, e70780, 2022
1892022
Amino acid interaction (INTAA) web server
J Galgonek, J Vymětal, D Jakubec, J Vondrášek
Nucleic Acids Research 45 (W1), W388-W392, 2017
452017
Sachem: a chemical cartridge for high-performance substructure search
M Kratochvíl, J Vondrášek, J Galgonek
Journal of cheminformatics 10, 1-11, 2018
302018
The LOTUS initiative for open natural products research: knowledge management through Wikidata
A Rutz, M Sorokina, J Galgonek, D Mietchen, E Willighagen, A Gaudry, ...
BioRxiv, 2021.02. 28.433265, 2021
282021
Interoperable chemical structure search service
M Kratochvíl, J Vondrášek, J Galgonek
Journal of cheminformatics 11, 1-7, 2019
192019
Toward Ab Initio Protein Folding: Inherent Secondary Structure Propensity of Short Peptides from the Bioinformatics and Quantum-Chemical Perspective
M Culka, J Galgonek, J Vymetal, J Vondrasek, L Rulisek
The Journal of Physical Chemistry B 123 (6), 1215-1227, 2019
172019
Advanced SPARQL querying in small molecule databases
J Galgonek, T Hurt, V Michlíková, P Onderka, J Schwarz, J Vondrášek
Journal of cheminformatics 8, 1-14, 2016
162016
SProt: sphere-based protein structure similarity algorithm
J Galgonek, D Hoksza, T Skopal
Proteome science 9, 1-12, 2011
162011
IDSM ChemWebRDF: SPARQLing small-molecule datasets
J Galgonek, J Vondrášek
Journal of Cheminformatics 13 (1), 38, 2021
132021
Open natural products research: curation and dissemination of biological occurrences of chemical structures through Wikidata
A Rutz, M Sorokina, J Galgonek, D Mietchen, E Willighagen, J Graham, ...
bioRxiv 28 (2), 43326, 2021
112021
Amino Acid Interactions (INTAA) web server v2. 0: a single service for computation of energetics and conservation in biomolecular 3D structures
J Vymětal, D Jakubec, J Galgonek, J Vondrášek
Nucleic Acids Research 49 (W1), W15-W20, 2021
102021
On InChI and evaluating the quality of cross-reference links
J Galgonek, J Vondrášek
Journal of cheminformatics 6, 1-15, 2014
72014
The LOTUS initiative for open knowledge management in natural products research. Elife 11
A Rutz, M Sorokina, J Galgonek, D Mietchen, E Willighagen, A Gaudry, ...
62022
A comparison of approaches to accessing existing biological and chemical relational databases via SPARQL
J Galgonek, J Vondrášek
Journal of Cheminformatics 15 (1), 61, 2023
52023
Computational methods for the description of pharmacologically relevant platinum complexes–molecular structure and bond dissociation
M Kokoschka, J Galgonek, J Vondrasek, P Hobza
Physical Chemistry Chemical Physics 18 (5), 4051-4062, 2016
52016
Density-based classification of protein structures using iterative TM-score
D Hoksza, J Galgonek
2009 IEEE International Conference on Bioinformatics and Biomedicine …, 2009
52009
On the effectiveness of distances measuring protein structure similarity
J Galgonek, D Hokzsa
2009 Second International Workshop on Similarity Search and Applications …, 2009
52009
What are the minimal folding seeds in proteins? Experimental and theoretical assessment of secondary structure propensities of small peptide fragments
Z Osifová, T Kalvoda, J Galgonek, M Culka, J Vondrášek, P Bouř, ...
Chemical Science 15 (2), 594-608, 2024
42024
The LOTUS initiative for knowledge sharing in Natural Products research
A Rutz, M Sorokina, J Galgonek, D Mietchen, E Willighagen, A Gaudry, ...
Planta Medica 87 (15), SL29, 2021
32021
SMILE-A Framework for Semantic Applications.
J Galgonek, T Knap, M Krulis, M Necaský
OTM Workshops 6428, 53-54, 2010
32010
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