Підписатись
Sagnik Banerjee
Sagnik Banerjee
Senior Bioinformatics Scientist
Підтверджена електронна адреса в iastate.edu
Назва
Посилання
Посилання
Рік
Small RNA discovery in the interaction between barley and the powdery mildew pathogen
M Hunt, S Banerjee, P Surana, M Liu, G Fuerst, S Mathioni, BC Meyers, ...
BMC genomics 20, 1-21, 2019
452019
FINDER: an automated software package to annotate eukaryotic genes from RNA-Seq data and associated protein sequences
S Banerjee, P Bhandary, M Woodhouse, TZ Sen, RP Wise, CM Andorf
BMC bioinformatics 22, 1-26, 2021
372021
Next-generation yeast-two-hybrid analysis with Y2H-SCORES identifies novel interactors of the MLA immune receptor
V Velásquez-Zapata, JM Elmore, S Banerjee, KS Dorman, RP Wise
PLoS Computational Biology 17 (4), e1008890, 2021
31*2021
De novo transcriptome of Phakopsora pachyrhizi uncovers putative effector repertoire during infection
MG Elmore, S Banerjee, KF Pedley, A Ruck, SA Whitham
Physiological and Molecular Plant Pathology 110, 101464, 2020
232020
NGPINT: a next-generation protein–protein interaction software
S Banerjee, V Velásquez-Zapata, G Fuerst, JM Elmore, RP Wise
Briefings in Bioinformatics, 2020
182020
A study of N-gram and Embedding Representations for Native Language Identification
S Vajjala, S Banerjee
Proceedings of the 12th Workshop on Innovative Use of NLP for Building …, 2017
142017
Big data analytics and its prospects in computational proteomics
S Banerjee, S Basu, M Nasipuri
Information Systems Design and Intelligent Applications: Proceedings of …, 2015
122015
Powdery mildew effectors AVRA1 and BEC1016 target the ER J-domain protein HvERdj3B required for immunity in barley
HTC Zizhang Li, Valeria Velásquez-Zapata, J. Mitch Elmore, Xuan Li, Wenjun ...
Molecular Plant Pathology 25 (5), 2024
10*2024
PhospredRF: Prediction of protein phosphorylation sites using a consensus of random forest classifiers
S Banerjee, S Basu, D Ghosh, M Nasipuri
2015 International Conference and Workshop on Computing and Communication …, 2015
82015
JUPred_MLP: prediction of phosphorylation sites using a consensus of MLP classifiers
S Banerjee, D Ghosh, S Basu, M Nasipuri
Proceedings of the 4th International Conference on Frontiers in Intelligent …, 2016
52016
Improving protein protein interaction prediction by choosing appropriate physiochemical properties of amino acids
S Banerjee, S Nag, S Tapadar, S Ghosh, S Guha, S Bakshi
2015 International Conference and Workshop on Computing and Communication …, 2015
42015
A genetic algorithm based pattern matcher
S Banerjee, T Chakrabarti, D Sinha
Int. J. of Scientific & Eng. Res 3 (11), 2012
22012
GOThresher: a program to remove annotation biases from protein function annotation datasets
P Joshi, S Banerjee, X Hu, PM Khade, I Friedberg
Bioinformatics 39 (1), btad048, 2023
12023
ABRIDGE: An ultra-compression software for SAM alignment files
S Banerjee, C Andorf
bioRxiv, 2022.01. 04.474935, 2022
12022
JUPred_SVM: Prediction of Phosphorylation Sites using a consensus of SVM classifiers
S Banerjee, D Ghosh, S Basu, M Nasipuri
Proceedings of Fifth International Conference on Soft Computing for Problem …, 2016
12016
Identification of relevant physico chemical properties of amino acids with respect to protein glycosylation prediction
S Banerjee, B Mitra, A Chatterjee, A Santra, B Chatterjee
2015 International Conference and Workshop on Computing and Communication …, 2015
12015
Improvement of protein disorder prediction by brainstorming consensus
S Banerjee, S Guha, A Dutta, S Dutta
2015 International Conference and Workshop on Computing and Communication …, 2015
12015
Finding all Occurrences of a Pattern by a Genetic Algorithm based Divide-and-Conquer Method
S Banerjee, T Chakrabarti, D Sinha
International Journal of Computer Applications 64 (18), 2013
12013
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