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Tyler K. Chafin
Tyler K. Chafin
Wellcome Sanger Institute | Tree of Life Informatics Infrastructure
Підтверджена електронна адреса в sanger.ac.uk - Домашня сторінка
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Посилання
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BA3‐SNPs: Contemporary migration reconfigured in BayesAss for next‐generation sequence data
SM Mussmann, MR Douglas, TK Chafin, ME Douglas
Methods in Ecology and Evolution 10 (10), 1808-1813, 2019
1532019
AdmixPipe: population analyses in Admixture for non-model organisms
SM Mussmann, MR Douglas, TK Chafin, ME Douglas
BMC Bioinformatics 21 (1), 1-9, 2020
462020
Hybridization drives genetic erosion in sympatric desert fishes of western North America
TK Chafin, MR Douglas, BT Martin, ME Douglas
Heredity 123 (6), 759-773, 2019
422019
Contrasting signatures of introgression in North American box turtle (Terrapene spp.) contact zones
BT Martin, MR Douglas, TK Chafin, JS Placyk Jr, RD Birkhead, CA Phillips, ...
Molecular Ecology 29 (21), 4186-4202, 2020
302020
FRAGMATIC: in silico locus prediction and its utility in optimizing ddRADseq projects
TK Chafin, BT Martin, SM Mussmann, MR Douglas, ME Douglas
Conservation Genetics Resources 10, 325-328, 2018
292018
Spatial population genetics in heavily managed species: Separating patterns of historical translocation from contemporary gene flow in white-tailed deer
TK Chafin, ZD Zbinden, MR Douglas, BT Martin, CR Middaugh, MC Gray, ...
Evolutionary Applications 14 (6), 1673-1689, 2021
242021
Taxonomic uncertainty and the anomaly zone: phylogenomics disentangle a rapid radiation to resolve contentious species (Gila robusta complex) in the Colorado River
TK Chafin, MR Douglas, MR Bangs, BT Martin, SM Mussmann, ...
Genome Biology and Evolution 13 (9), evab200, 2021
23*2021
The choices we make and the impacts they have: Machine learning and species delimitation in North American box turtles (Terrapene spp.)
BT Martin, TK Chafin, MR Douglas, JS Placyk, RD Birkhead, CA Phillips, ...
Molecular Ecology Resources, 2021
18*2021
Age structuring and spatial heterogeneity in prion protein gene (PRNP) polymorphism in white-tailed deer
TK Chafin, MR Douglas, BT Martin, ZD Zbinden, CR Middaugh, ...
Prion 14 (1), 238-248, 2020
182020
Gene flow and species delimitation in fishes of Western North America: Flannelmouth (Catostomus latipinnis) and Bluehead sucker (C. Pantosteus discobolus)
MR Bangs, MR Douglas, TK Chafin, ME Douglas
Ecology and Evolution 10 (13), 6477-6493, 2020
172020
MrBait: universal identification and design of targeted-enrichment capture probes
TK Chafin, MR Douglas, ME Douglas
Bioinformatics 34 (24), 4293-4296, 2018
172018
ClineHelpR: An R package for genomic cline outlier detection and visualization
BT Martin, TK Chafin, MR Douglas, ME Douglas
BMC Bioinformatics 22, 501, 2021
15*2021
A community genomics approach to natural hybridization
ZD Zbinden, MR Douglas, TK Chafin, ME Douglas
Proceedings of the Royal Society: B 290 (1999), 20230768, 2023
122023
Microbial biogeography through the lens of exotic species: the recent introduction and spread of the freshwater diatom Discostella asterocostata in the United States
AJ Alverson, TK Chafin, KA Jones, KM Manoylov, H Johnson, ML Julius, ...
Biological Invasions 23, 2191–2204, 2021
102021
Jetstream—Early operations performance, adoption, and impacts
DY Hancock, CA Stewart, M Vaughn, J Fischer, JM Lowe, G Turner, ...
Concurrency and Computation: Practice and Experience 31 (16), e4683, 2019
92019
Riverscape community genomics: A comparative analytical approach to identify common drivers of spatial structure
ZD Zbinden, MR Douglas, TK Chafin, ME Douglas
Molecular Ecology 32 (24), 6743-6765, 2023
82023
Are populations of economically important bonefish and queen conch ‘open’or ‘closed’in the northern Caribbean Basin?
MR Douglas, TK Chafin, JE Claussen, DP Philipp, ME Douglas
Marine Ecology 42 (2), e12639, 2021
82021
Genome-wide local ancestries discriminate homoploid hybrid speciation from secondary introgression in the red wolf (Canidae: Canis rufus)
TK Chafin, MR Douglas, ME Douglas
bioRxiv, 2020.04. 05.026716, 2020
72020
Ozark fish community genomics: ddRAD seq
ZD Zbinden, MR Douglas, TK Chafin, ME Douglas
NCBI sequence read archive, BioProject: PRJNA809538, 2022
32022
Metapopulation connectivity in Voles (Microtus sp.) as a gauge for tallgrass prairie restoration in midwestern North America
MR Douglas, SM Mussmann, TK Chafin, WJB Anthonysamy, MA Davis, ...
PLoS One 16 (12), e0260344, 2021
32021
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