Підписатись
Paolo Ribeca
Paolo Ribeca
Biomathematics and Statistics Scotland, UK
Підтверджена електронна адреса в bioss.ac.uk
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Посилання
Посилання
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An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
175482012
Landscape of transcription in human cells
S Djebali, CA Davis, A Merkel, A Dobin, T Lassmann, A Mortazavi, ...
Nature 489 (7414), 101-108, 2012
58092012
The tomato genome sequence provides insights into fleshy fruit evolution
T Tomato Genome Consortium
Nature 485 (7400), 635, 2012
33762012
Transcriptome and genome sequencing uncovers functional variation in humans
T Lappalainen, M Sammeth, MR Friedländer, PAC ‘t Hoen, J Monlong, ...
Nature 501 (7468), 506-511, 2013
21282013
A user's guide to the encyclopedia of DNA elements (ENCODE)
ENCODE Project Consortium
PLoS Biol 9 (4), e1001046, 2011
14982011
Assessment of transcript reconstruction methods for RNA-seq
T Steijger, JF Abril, PG Engström, F Kokocinski, TJ Hubbard, R Guigó, ...
Nature methods 10 (12), 1177-1184, 2013
7812013
The GEM mapper: fast, accurate and versatile alignment by filtration
S Marco-Sola, M Sammeth, R Guigó, P Ribeca
Nature methods 9 (12), 1185-1188, 2012
6812012
Systematic evaluation of spliced alignment programs for RNA-seq data
PG Engström, T Steijger, B Sipos, GR Grant, A Kahles, G Rätsch, ...
Nature methods 10 (12), 1185-1191, 2013
6052013
Fast computation and applications of genome mappability
T Derrien, J Estellé, S Marco Sola, DG Knowles, E Raineri, R Guigó, ...
PloS one 7 (1), e30377, 2012
5822012
Effect of predicted protein-truncating genetic variants on the human transcriptome
MA Rivas, M Pirinen, DF Conrad, M Lek, EK Tsang, KJ Karczewski, ...
Science 348 (6235), 666-669, 2015
3652015
A comprehensive assessment of somatic mutation detection in cancer using whole-genome sequencing
TS Alioto, I Buchhalter, S Derdak, B Hutter, MD Eldridge, E Hovig, ...
Nature communications 6 (1), 10001, 2015
3512015
Modelling and simulating generic RNA-Seq experiments with the flux simulator
T Griebel, B Zacher, P Ribeca, E Raineri, V Lacroix, R Guigó, M Sammeth
Nucleic acids research 40 (20), 10073-10083, 2012
3452012
Reproducibility of high-throughput mRNA and small RNA sequencing across laboratories
PAC 't Hoen, MR Friedländer, J Almlöf, M Sammeth, I Pulyakhina, ...
Nature biotechnology 31 (11), 1015-1022, 2013
2772013
Genome sequence of the olive tree, Olea europaea
F Cruz, I Julca, J Gómez-Garrido, D Loska, M Marcet-Houben, E Cano, ...
Gigascience 5 (1), 29, 2016
2242016
Extreme genomic erosion after recurrent demographic bottlenecks in the highly endangered Iberian lynx
F Abascal, A Corvelo, F Cruz, JL Villanueva-Cañas, A Vlasova, ...
Genome biology 17, 1-19, 2016
1892016
From useful algorithms for slowly convergent series to physical predictions based on divergent perturbative expansions
E Caliceti, M Meyer-Hermann, P Ribeca, A Surzhykov, UD Jentschura
Physics reports 446 (1-3), 1-96, 2007
1492007
Transposons played a major role in the diversification between the closely related almond and peach genomes: results from the almond genome sequence
T Alioto, KG Alexiou, A Bardil, F Barteri, R Castanera, F Cruz, A Dhingra, ...
The Plant Journal 101 (2), 455-472, 2020
1302020
Networks of Ethereum Non-Fungible Tokens: A graph-based analysis of the ERC-721 ecosystem
S Casale-Brunet, P Ribeca, P Doyle, M Mattavelli
2021 IEEE International Conference on Blockchain (Blockchain), 188-195, 2021
852021
Evidence for transcript networks composed of chimeric RNAs in human cells
S Djebali, J Lagarde, P Kapranov, V Lacroix, C Borel, JM Mudge, ...
PLoS One 7 (1), e28213, 2012
682012
Bioinformatics for high throughput sequencing
N Rodríguez-Ezpeleta, M Hackenberg, AM Aransay
Springer Science & Business Media, 2011
642011
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Статті 1–20