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Jason Sahl
Jason Sahl
Associate Professor of Biology at Northern Arizona University
Підтверджена електронна адреса в nau.edu - Домашня сторінка
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Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities
PD Schloss, SL Westcott, T Ryabin, JR Hall, M Hartmann, EB Hollister, ...
Applied and environmental microbiology 75 (23), 7537-7541, 2009
217302009
Origins of the E. coli strain causing an outbreak of hemolytic–uremic syndrome in Germany
DA Rasko, DR Webster, JW Sahl, A Bashir, N Boisen, F Scheutz, ...
New England Journal of Medicine 365 (8), 709-717, 2011
10962011
Yersinia pestis and the Plague of Justinian 541–543 AD: a genomic analysis
DM Wagner, J Klunk, M Harbeck, A Devault, N Waglechner, JW Sahl, ...
The Lancet infectious diseases 14 (4), 319-326, 2014
5962014
The large-scale blast score ratio (LS-BSR) pipeline: a method to rapidly compare genetic content between bacterial genomes
J Sahl, JG Caporaso, D Rasko, P Keim
PeerJ 2 (e332), 2014
2742014
17th century variola virus reveals the recent history of smallpox
AT Duggan, MF Perdomo, D Piombino-Mascali, S Marciniak, D Poinar, ...
Current Biology 26 (24), 3407-3412, 2016
2562016
NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats
JW Sahl, D Lemmer, J Travis, JM Schupp, JD Gillece, M Aziz, EM Driebe, ...
Microbial genomics 2 (8), e000074, 2016
2462016
Best practices for evaluating single nucleotide variant calling methods for microbial genomics
ND Olson, SP Lund, RE Colman, JT Foster, JW Sahl, JM Schupp, P Keim, ...
Frontiers in genetics 6, 235, 2015
2342015
Eighteenth century Yersinia pestis genomes reveal the long-term persistence of an historical plague focus
KI Bos, A Herbig, J Sahl, N Waglechner, M Fourment, SA Forrest, J Klunk, ...
Elife 5, e12994, 2016
2022016
Chemical sensing in mammalian host–bacterial commensal associations
DT Hughes, DA Terekhova, L Liou, CJ Hovde, JW Sahl, AV Patankar, ...
Proceedings of the National Academy of Sciences 107 (21), 9831-9836, 2010
1582010
A Comparative Genomic Analysis of Diverse Clonal Types of Enterotoxigenic Escherichia coli Reveals Pathovar-Specific Conservation
JW Sahl, H Steinsland, JC Redman, SV Angiuoli, JP Nataro, ...
Infection and immunity 79 (2), 950-960, 2011
1562011
Evolution of a pathogen: a comparative genomics analysis identifies a genetic pathway to pathogenesis in Acinetobacter
JW Sahl, JD Gillece, JM Schupp, VG Waddell, EM Driebe, DM Engelthaler, ...
PloS one 8 (1), e54287, 2013
1482013
Subsurface microbial diversity in deep-granitic-fracture water in Colorado
JW Sahl, R Schmidt, ED Swanner, KW Mandernack, AS Templeton, ...
Applied and Environmental Microbiology 74 (1), 143-152, 2008
1482008
Refining the pathovar paradigm via phylogenomics of the attaching and effacing Escherichia coli
TH Hazen, JW Sahl, CM Fraser, MS Donnenberg, F Scheutz, DA Rasko
Proceedings of the National Academy of Sciences 110 (31), 12810-12815, 2013
1282013
Comparative Genomics and stx Phage Characterization of LEE-Negative Shiga Toxin-Producing Escherichia coli
SR Steyert, JW Sahl, CM Fraser, LD Teel, F Scheutz, DA Rasko
Frontiers in cellular and infection microbiology 2, 133, 2012
1202012
Defining the phylogenomics of Shigella species: a pathway to diagnostics
JW Sahl, CR Morris, J Emberger, CM Fraser, JB Ochieng, J Juma, ...
Journal of clinical microbiology 53 (3), 951-960, 2015
1052015
Comparison of normalization methods for construction of large, multiplex amplicon pools for next-generation sequencing
JK Harris, JW Sahl, TA Castoe, BD Wagner, DD Pollock, JR Spear
Applied and environmental microbiology 76 (12), 3863-3868, 2010
962010
Genomic comparison of multi-drug resistant invasive and colonizing Acinetobacter baumannii isolated from diverse human body sites reveals genomic plasticity
JW Sahl, JK Johnson, AD Harris, AM Phillippy, WW Hsiao, KA Thom, ...
BMC genomics 12, 1-12, 2011
892011
Diversity, Virulence, and Antimicrobial Resistance in Isolates From the Newly Emerging Klebsiella pneumoniae ST101 Lineage
CC Roe, AJ Vazquez, EP Esposito, R Zarrilli, JW Sahl
Frontiers in microbiology 10, 542, 2019
862019
Comparative genomic analyses reveal broad diversity in botulinum-toxin-producing Clostridia
CHD Williamson, JW Sahl, TJ Smith, G Xie, BT Foley, LA Smith, ...
BMC genomics 17, 1-20, 2016
862016
A Bacillus anthracis genome sequence from the Sverdlovsk 1979 autopsy specimens
JW Sahl, T Pearson, R Okinaka, JM Schupp, JD Gillece, H Heaton, ...
MBio 7 (5), 10.1128/mbio. 01501-16, 2016
842016
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