| The First Steps of Adaptation of Escherichia coli to the Gut Are Dominated by Soft Sweeps J Barroso-Batista, A Sousa, M Lourenço, ML Bergman, D Sobral, ... PLoS genetics 10 (3), e1004182, 2014 | 190 | 2014 |
| The spatial heterogeneity of the gut limits predation and fosters coexistence of bacteria and bacteriophages M Lourenço, L Chaffringeon, Q Lamy-Besnier, T Pédron, P Campagne, ... Cell Host & Microbe 28 (3), 390-401. e5, 2020 | 159 | 2020 |
| The battle within: interactions of bacteriophages and bacteria in the gastrointestinal tract L De Sordi, M Lourenço, L Debarbieux Cell host & microbe 25 (2), 210-218, 2019 | 139 | 2019 |
| “I will survive”: A tale of bacteriophage-bacteria coevolution in the gut L De Sordi, M Lourenço, L Debarbieux Gut microbes 10 (1), 92-99, 2019 | 90 | 2019 |
| Horizontal gene transfer among host-associated microbes JM de Sousa, M Lourenço, I Gordo Cell Host & Microbe 31 (4), 513-527, 2023 | 52 | 2023 |
| Recurrent reverse evolution maintains polymorphism after strong bottlenecks in commensal gut bacteria A Sousa, RS Ramiro, J Barroso-Batista, D Güleresi, M Lourenço, I Gordo Molecular biology and evolution 34 (11), 2879-2892, 2017 | 44 | 2017 |
| A Mutational Hotspot and Strong Selection Contribute to the Order of Mutations Selected for during Escherichia coli Adaptation to the Gut M Lourenço, RS Ramiro, D Güleresi, J Barroso-Batista, KB Xavier, I Gordo, ... PLoS genetics 12 (11), e1006420, 2016 | 44 | 2016 |
| The diversity of bacterial lifestyles hampers bacteriophage tenacity M Lourenço, L De Sordi, L Debarbieux Viruses 10 (6), 327, 2018 | 36 | 2018 |
| The gut environment regulates bacterial gene expression which modulates susceptibility to bacteriophage infection M Lourenço, L Chaffringeon, Q Lamy-Besnier, M Titécat, T Pédron, ... Cell Host & Microbe 30 (4), 556-569. e5, 2022 | 33 | 2022 |
| Phages against noncapsulated Klebsiella pneumoniae: broader host range, slower resistance M Lourenço, L Osbelt, V Passet, F Gravey, D Megrian, T Strowig, ... Microbiology spectrum 11 (4), e04812-22, 2023 | 22 | 2023 |
| Prophylactic Administration of a Bacteriophage Cocktail Is Safe and Effective in Reducing Salmonella enterica Serovar Typhimurium Burden in Vivo Q Lamy-Besnier, L Chaffringeon, M Lourenço, RB Payne, JT Trinh, ... Microbiology Spectrum 9 (1), 10.1128/spectrum. 00497-21, 2021 | 17 | 2021 |
| Systematic interrogation of CRISPR antimicrobials in Klebsiella pneumoniae reveals nuclease-, guide- and strain-dependent features influencing antimicrobial … E Vialetto, S Miele, MG Goren, J Yu, Y Yu, D Collias, B Beamud, L Osbelt, ... Nucleic Acids Research 52 (10), 6079-6091, 2024 | 7 | 2024 |
| Evolution of Escherichia coli in the mouse gut MM Lourenço PQDT-Global, 2014 | 1 | 2014 |
| Deciphering in vivo efficacy of virulent phages in the mammalian gut MM Lourenço Sorbonne Université, 2019 | | 2019 |