| Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography P Normand, P Lapierre, LS Tisa, JP Gogarten, N Alloisio, E Bagnarol, ... Genome research 17 (1), 7-15, 2007 | 439 | 2007 |
| Estimating the size of the bacterial pan-genome P Lapierre, JP Gogarten Trends in genetics 25 (3), 107-110, 2009 | 428 | 2009 |
| Leaderless transcripts and small proteins are common features of the mycobacterial translational landscape SS Shell, J Wang, P Lapierre, M Mir, MR Chase, MM Pyle, R Gawande, ... PLoS genetics 11 (11), e1005641, 2015 | 258 | 2015 |
| On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales O Zhaxybayeva, KS Swithers, P Lapierre, GP Fournier, DM Bickhart, ... Proceedings of the National Academy of Sciences 106 (14), 5865-5870, 2009 | 247 | 2009 |
| The 2021 WHO catalogue of Mycobacterium tuberculosis complex mutations associated with drug resistance: a genotypic analysis TM Walker, P Miotto, CU Köser, PW Fowler, J Knaggs, Z Iqbal, M Hunt, ... The Lancet Microbe 3 (4), e265-e273, 2022 | 191 | 2022 |
| Characterization of foodborne outbreaks of Salmonella enterica serovar Enteritidis with whole-genome sequencing single nucleotide polymorphism-based analysis for surveillance … AJ Taylor, V Lappi, WJ Wolfgang, P Lapierre, MJ Palumbo, C Medus, ... Journal of clinical microbiology 53 (10), 3334-3340, 2015 | 165 | 2015 |
| Porphyromonas gulae sp. nov., an anaerobic, gram-negative coccobacillus from the gingival sulcus of various animal hosts. D Fournier, C Mouton, P Lapierre, T Kato, K Okuda, C Ménard International journal of systematic and evolutionary microbiology 51 (3 …, 2001 | 152 | 2001 |
| Comprehensive whole-genome sequencing and reporting of drug resistance profiles on clinical cases of Mycobacterium tuberculosis in New York State J Shea, TA Halse, P Lapierre, M Shudt, D Kohlerschmidt, P Van Roey, ... Journal of clinical microbiology 55 (6), 1871-1882, 2017 | 143 | 2017 |
| Low species barriers in halophilic archaea and the formation of recombinant hybrids A Naor, P Lapierre, M Mevarech, RT Papke, U Gophna Current biology 22 (15), 1444-1448, 2012 | 142 | 2012 |
| Genome mosaicism and organismal lineages O Zhaxybayeva, P Lapierre, JP Gogarten TRENDS in Genetics 20 (5), 254-260, 2004 | 114 | 2004 |
| Ancient gene duplications and the root (s) of the tree of life O Zhaxybayeva, P Lapierre, JP Gogarten Protoplasma 227, 53-64, 2005 | 86 | 2005 |
| Intercellular communication and conjugation are mediated by ESX secretion systems in mycobacteria TA Gray, RR Clark, N Boucher, P Lapierre, C Smith, KM Derbyshire Science 354 (6310), 347-350, 2016 | 82 | 2016 |
| Assessing nanopore sequencing for clinical diagnostics: a comparison of next-generation sequencing (NGS) methods for Mycobacterium tuberculosis C Smith, TA Halse, J Shea, H Modestil, RC Fowler, KA Musser, V Escuyer, ... Journal of clinical microbiology 59 (1), 10.1128/jcm. 00583-20, 2020 | 79 | 2020 |
| A large community outbreak of Legionnaires’ disease associated with a cooling tower in New York City, 2015 D Weiss, C Boyd, JL Rakeman, SK Greene, R Fitzhenry, T McProud, ... Public health reports 132 (2), 241-250, 2017 | 76 | 2017 |
| Genome-Scale Mapping of Escherichia coli σ54 Reveals Widespread, Conserved Intragenic Binding RP Bonocora, C Smith, P Lapierre, JT Wade PLoS genetics 11 (10), e1005552, 2015 | 66 | 2015 |
| Legionnaires’ disease outbreaks and cooling towers, New York city, New York, USA R Fitzhenry, D Weiss, D Cimini, S Balter, C Boyd, L Alleyne, R Stewart, ... Emerging infectious diseases 23 (11), 1769, 2017 | 65 | 2017 |
| Low-Level Rifampin Resistance and rpoB Mutations in Mycobacterium tuberculosis: an Analysis of Whole-Genome Sequencing and Drug Susceptibility Test Data … J Shea, TA Halse, D Kohlerschmidt, P Lapierre, HA Modestil, CH Kearns, ... Journal of clinical microbiology 59 (4), 10.1128/jcm. 01885-20, 2021 | 62 | 2021 |
| Genomic resolution of outbreak-associated Legionella pneumophila serogroup 1 isolates from New York State BH Raphael, DJ Baker, E Nazarian, P Lapierre, D Bopp, ... Applied and environmental microbiology 82 (12), 3582-3590, 2016 | 57 | 2016 |
| A rooted net of life D Williams, GP Fournier, P Lapierre, KS Swithers, AG Green, CP Andam, ... Biology direct 6, 1-20, 2011 | 54 | 2011 |
| The localized rise of a B. 1.526 SARS-CoV-2 variant containing an E484K mutation in New York State E Lasek-Nesselquist, P Lapierre, E Schneider, KS George, J Pata medRxiv, 2021.02. 26.21251868, 2021 | 52 | 2021 |
