Michael M. Hoffman

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William Stafford NobleProfessor of Genome Sciences, University of Washington在 uw.edu 的电子邮件经过验证
Jeffrey A. BilmesProfessor of Electrical & Computer Engineering & Computer Science, University of Washington Seattle在 uw.edu 的电子邮件经过验证
Maxwell W LibbrechtAssistant Professor, Computing Science, Simon Fraser University在 sfu.ca 的电子邮件经过验证
Anshul KundajeAssociate Professor, Dept. of Genetics, Dept. of Computer Science, Stanford University在 stanford.edu 的电子邮件经过验证
Orion BuskePhenoTips在 cs.toronto.edu 的电子邮件经过验证
Ewan BirneyDirector, EMBL-EBI在 ebi.ac.uk 的电子邮件经过验证
Mehran KarimzadehExai Bio在 exai.bio 的电子邮件经过验证
Zhiping WengProf & Chair, Department of Genomics and Computational Biology, UMASS Medical School在 umassmed.edu 的电子邮件经过验证
Danielle DeniskoPhD student, Bioinformatics and Integrative Genomics, Harvard Medical School在 g.harvard.edu 的电子邮件经过验证
Shu Yi ShenUniversity Health Network在 uhnresearch.ca 的电子邮件经过验证
Bo WangChief AI Scientist,UHN; CIFAR AI Chair, Vector Institute; Assistant Professor, U of Toronto在 vectorinstitute.ai 的电子邮件经过验证
Anna GoldenbergScientist, SickKids Research Institute; Assistant Professor Department of Computer Science, University of Toronto在 utoronto.ca 的电子邮件经过验证
Coby VinerPostdoctoral Researcher, Department of Biology, University of Pennsylvania在 cs.toronto.edu 的电子邮件经过验证
Scott V Bratman, MD PhDSenior Scientist (Principal Investigator), Princess Margaret Cancer Centre, University Health在 uhnresearch.ca 的电子邮件经过验证
Daniel De CarvalhoProfessor, University of Toronto. Senior Scientist, Princess Margaret Cancer Centre在 uhnresearch.ca 的电子邮件经过验证
Casey S. GreeneBiomedical Informatics; Center for Health AI; University of Colorado Anschutz Medical在 cuanschutz.edu 的电子邮件经过验证
Su-In LeeComputer Science & Engineering, University of Washington在 cs.washington.edu 的电子邮件经过验证
Jie WangTome Biosciences在 tome.bio 的电子邮件经过验证
Ross C. HardisonProfessor Emeritus of Biochemistry and Molecular Biology, The Pennsylvania State University在 psu.edu 的电子邮件经过验证
Manolis KellisProfessor of Computer Science, MIT and Broad Institute在 mit.edu 的电子邮件经过验证

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Michael M. Hoffman

Chair and Senior Scientist, University Health Network/Associate Professor, University of Toronto

在 utoronto.ca 的电子邮件经过验证 - 首页

Epigenomics Computational Genomics Machine Learning Computational Biology Bioinformatics


标题按引用次数排序按年份排序按标题排序	引用次数引用次数	年份
An integrated Encyclopedia of DNA Elements in the human genome ENCODE Project Consortium Nature 489 (7414), 57-74, 2012	17483	2012
Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution International Chicken Genome Sequencing Consortium Nature 432 (7018), 695-716, 2004	2965*	2004
ChIP-seq guidelines and practices used by the ENCODE and modENCODE consortia SG Landt, GK Marinov, A Kundaje, P Kheradpour, F Pauli, S Batzoglou, ... Genome Research 22 (9), 1813-31, 2012	2348	2012
Opportunities and obstacles for deep learning in biology and medicine T Ching, DS Himmelstein, BK Beaulieu-Jones, AA Kalinin, BT Do, ... Journal of the royal society interface 15 (141), 20170387, 2018	2292	2018
A user's guide to the encyclopedia of DNA elements (ENCODE) ENCODE Project Consortium PLoS biology 9 (4), e1001046, 2011	878	2011
Sensitive tumour detection and classification using plasma cell-free DNA methylomes SY Shen, R Singhania, G Fehringer, A Chakravarthy, MHA Roehrl, ... Nature 563 (7732), 579-583, 2018	810	2018
Unsupervised pattern discovery in human chromatin structure through genomic segmentation MM Hoffman, OJ Buske, J Wang, Z Weng, JA Bilmes, WS Noble Nature Methods 9 (5), 473, 2012	751	2012
A user's guide to the encyclopedia of DNA elements (ENCODE) RM Myers, J Stamatoyannopoulos, M Snyder, I Dunham, RC Hardison, ... PLoS biology 9 (4), 2011	688	2011
Integrative annotation of chromatin elements from ENCODE data MM Hoffman, J Ernst, SP Wilder, A Kundaje, RS Harris, M Libbrecht, ... Nucleic Acids Res 41 (2), 827-841, 2013	626	2013
Machine learning for integrating data in biology and medicine: Principles, practice, and opportunities M Zitnik, F Nguyen, B Wang, J Leskovec, A Goldenberg, MM Hoffman Information Fusion 50, 71-91, 2019	605	2019
Comparative analysis of metazoan chromatin organization JWK Ho, YL Jung, T Liu, BH Alver, S Lee, K Ikegami, KA Sohn, A Minoda, ... Nature 512 (7515), 449-452, 2014	430	2014
Transparency and reproducibility in artificial intelligence B Haibe-Kains, GA Adam, A Hosny, F Khodakarami, ... Nature 586 (7829), E14-E16, 2020	418	2020
TRIPOD+ AI statement: updated guidance for reporting clinical prediction models that use regression or machine learning methods GS Collins, KGM Moons, P Dhiman, RD Riley, AL Beam, B Van Calster, ... bmj 385, 2024	326	2024
Metrics reloaded: recommendations for image analysis validation L Maier-Hein, A Reinke, P Godau, MD Tizabi, F Buettner, E Christodoulou, ... Nature methods 21 (2), 195-212, 2024	299*	2024
Classification and interaction in random forests D Denisko, MM Hoffman Proceedings of the National Academy of Sciences 115 (8), 1690-1692, 2018	280	2018
Common limitations of image processing metrics: A picture story A Reinke, MD Tizabi, CH Sudre, M Eisenmann, T Rädsch, M Baumgartner, ... arXiv preprint arXiv:2104.05642, 2021	208	2021
Extending reference assembly models DM Church, VA Schneider, KM Steinberg, MC Schatz, AR Quinlan, ... Genome Biol 16, 13, 2015	203	2015
Reproducibility standards for machine learning in the life sciences BJ Heil, MM Hoffman, F Markowetz, SI Lee, CS Greene, SC Hicks Nature Methods 18 (10), 1132-1135, 2021	192	2021
GA4GH: International policies and standards for data sharing across genomic research and healthcare HL Rehm, AJH Page, L Smith, JB Adams, G Alterovitz, LJ Babb, ... Cell genomics 1 (2), 2021	191	2021
AANT: the Amino Acid–Nucleotide Interaction Database MM Hoffman, MA Khrapov, JC Cox, J Yao, L Tong, AD Ellington Nucleic Acids Research 32 (Database issue), D174-D181, 2004	169	2004

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