| SARS-CoV-2 titers in wastewater are higher than expected from clinically confirmed cases F Wu, J Zhang, A Xiao, X Gu, WL Lee, F Armas, K Kauffman, W Hanage, ... Msystems 5 (4), 10.1128/msystems. 00614-20, 2020 | 855* | 2020 |
| Adaptive evolution within gut microbiomes of healthy people S Zhao, TD Lieberman, M Poyet, KM Kauffman, SM Gibbons, M Groussin, ... Cell host & microbe 25 (5), 656-667. e8, 2019 | 356 | 2019 |
| A simple and efficient method for concentration of ocean viruses by chemical flocculation SG John, CB Mendez, L Deng, B Poulos, AKM Kauffman, S Kern, J Brum, ... Environmental Microbiology Reports 3 (2), 195-202, 2011 | 336 | 2011 |
| A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria KM Kauffman, FA Hussain, J Yang, P Arevalo, JM Brown, WK Chang, ... Nature 554 (7690), 118-122, 2018 | 210 | 2018 |
| High resolution time series reveals cohesive but short-lived communities in coastal plankton AM Martin-Platero, B Cleary, K Kauffman, SP Preheim, DJ McGillicuddy, ... Nature communications 9 (1), 266, 2018 | 146 | 2018 |
| The oral microbiome: diversity, biogeography and human health JL Baker, JL Mark Welch, KM Kauffman, JS McLean, X He Nature Reviews Microbiology 22 (2), 89-104, 2024 | 145 | 2024 |
| Rapid evolutionary turnover of mobile genetic elements drives bacterial resistance to phages FA Hussain, J Dubert, J Elsherbini, M Murphy, D VanInsberghe, P Arevalo, ... Science 374 (6566), 488-492, 2021 | 131 | 2021 |
| Phage–host coevolution in natural populations D Piel, M Bruto, Y Labreuche, F Blanquart, D Goudenège, R Barcia-Cruz, ... Nature Microbiology 7 (7), 1075-1086, 2022 | 127* | 2022 |
| Widespread distribution of prophage-encoded virulence factors in marine Vibrio communities D Castillo, K Kauffman, F Hussain, P Kalatzis, N Rørbo, MF Polz, ... Scientific reports 8 (1), 9973, 2018 | 122 | 2018 |
| Resolving the structure of phage–bacteria interactions in the context of natural diversity KM Kauffman, WK Chang, JM Brown, FA Hussain, J Yang, MF Polz, ... Nature communications 13 (1), 372, 2022 | 87 | 2022 |
| Identification and biosynthesis of thymidine hypermodifications in the genomic DNA of widespread bacterial viruses YJ Lee, N Dai, SE Walsh, S Müller, ME Fraser, KM Kauffman, C Guan, ... Proceedings of the National Academy of Sciences 115 (14), E3116-E3125, 2018 | 70 | 2018 |
| Reproducibility of Vibrionaceae population structure in coastal bacterioplankton G Szabo, SP Preheim, KM Kauffman, LA David, J Shapiro, EJ Alm, ... The ISME Journal, 2012 | 60 | 2012 |
| Streamlining standard bacteriophage methods for higher throughput KM Kauffman, MF Polz MethodsX 5, 159-172, 2018 | 55 | 2018 |
| Degradation of host translational machinery drives tRNA acquisition in viruses JY Yang, W Fang, F Miranda-Sanchez, JM Brown, KM Kauffman, ... Cell Systems 12 (8), 771-779. e5, 2021 | 52 | 2021 |
| Detection of Panulirus argus Virus 1 in Caribbean spiny lobsters MM Montgomery-Fullerton, RA Cooper, KM Kauffman, JD Shields, ... Diseases of aquatic organisms 76 (1), 1-6, 2007 | 43 | 2007 |
| A small number of phylogenetically distinct clonal complexes dominate a coastal Vibrio cholerae population PC Kirchberger, FD Orata, EJ Barlow, KM Kauffman, RJ Case, MF Polz, ... Applied and environmental microbiology 82 (18), 5576-5586, 2016 | 38 | 2016 |
| Viruses of the Nahant Collection, characterization of 251 marine Vibrionaceae viruses KM Kauffman, JM Brown, RS Sharma, D VanInsberghe, J Elsherbini, ... Scientific Data 5 (1), 1-11, 2018 | 37 | 2018 |
| Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains DJ Burks, S Norris, KM Kauffman, A Joy, P Arevalo, RK Azad, ... Microbiologyopen 6 (5), e00504, 2017 | 23 | 2017 |
| Culture‐independent tracking of Vibrio cholerae lineages reveals complex spatiotemporal dynamics in a natural population PC Kirchberger, FD Orata, T Nasreen, KM Kauffman, CL Tarr, RJ Case, ... Environmental Microbiology 22 (10), 4244-4256, 2020 | 20 | 2020 |
| Phages are unrecognized players in the ecology of the oral pathogen Porphyromonas gingivalis CB Matrishin, EM Haase, FE Dewhirst, JL Mark Welch, ... Microbiome 11 (1), 161, 2023 | 9 | 2023 |