Comprehensive variation discovery and recovery of missing sequence in the pig genome using multiple de novo assemblies M Li, L Chen, S Tian, Y Lin, Q Tang, X Zhou, D Li, CKL Yeung, T Che, ... Genome research 27 (5), 865-874, 2017 | 158 | 2017 |
A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome Y Zhao, Y Hou, Y Xu, Y Luan, H Zhou, X Qi, M Hu, D Wang, Z Wang, Y Fu, ... Nature communications 12 (1), 2217, 2021 | 110 | 2021 |
Detection of dietetically absorbed maize-derived microRNAs in pigs Y Luo, P Wang, X Wang, Y Wang, Z Mu, Q Li, Y Fu, J Xiao, G Li, Y Ma, ... Scientific reports 7 (1), 645, 2017 | 108 | 2017 |
A survey of transcriptome complexity in Sus scrofa using single-molecule long-read sequencing Y Li, C Fang, Y Fu, A Hu, C Li, C Zou, X Li, S Zhao, C Zhang, C Li DNA research 25 (4), 421-437, 2018 | 68 | 2018 |
A gene prioritization method based on a swine multi-omics knowledgebase and a deep learning model Y Fu, J Xu, Z Tang, L Wang, D Yin, Y Fan, D Zhang, F Deng, Y Zhang, ... Communications Biology 3 (1), 502, 2020 | 59 | 2020 |
Rapid visual CRISPR assay: A naked-eye colorimetric detection method for nucleic acids based on CRISPR/cas12a and a convolutional neural network S Xie, D Tao, Y Fu, B Xu, Y Tang, L Steinaa, JD Hemmink, W Pan, ... ACS synthetic biology 11 (1), 383-396, 2021 | 45 | 2021 |
HIBLUP: an integration of statistical models on the BLUP framework for efficient genetic evaluation using big genomic data L Yin, H Zhang, Z Tang, D Yin, Y Fu, X Yuan, X Li, X Liu, S Zhao Nucleic acids research 51 (8), 3501-3512, 2023 | 43 | 2023 |
Identification of Differentially Expressed miRNAs between White and Black Hair Follicles by RNA-Sequencing in the Goat (Capra hircus) Z Wu, Y Fu, J Cao, M Yu, X Tang, S Zhao International journal of molecular sciences 15 (6), 9531-9545, 2014 | 41 | 2014 |
A gene–phenotype relationship extraction pipeline from the biomedical literature using a representation learning approach W Xing, J Qi, X Yuan, L Li, X Zhang, Y Fu, S Xiong, L Hu, J Peng Bioinformatics 34 (13), i386-i394, 2018 | 39 | 2018 |
Comprehensive transcriptional landscape of porcine cardiac and skeletal muscles reveals differences of aging J Chen, Q Zou, D Lv, Y Wei, MA Raza, Y Chen, P Li, X Xi, H Xu, A Wen, ... Oncotarget 9 (2), 1524, 2017 | 39 | 2017 |
Genomic analysis reveals selection in Chinese native black pig Y Fu, C Li, Q Tang, S Tian, L Jin, J Chen, M Li, C Li Scientific reports 6 (1), 36354, 2016 | 33 | 2016 |
Enhancer-promoter interaction maps provide insights into skeletal muscle-related traits in pig genome J Li, Y Xiang, L Zhang, X Qi, Z Zheng, P Zhou, Z Tang, Y Jin, Q Zhao, Y Fu, ... BMC biology 20 (1), 136, 2022 | 32 | 2022 |
Identification and functional analysis of long intergenic non-coding RNAs underlying intramuscular fat content in pigs C Zou, L Li, X Cheng, C Li, Y Fu, C Fang, C Li Frontiers in Genetics 9, 102, 2018 | 32 | 2018 |
Genome-wide landscape of DNA methylomes and their relationship with mRNA and miRNA transcriptomes in oxidative and glycolytic skeletal muscles L Shen, J Du, Y Xia, Z Tan, Y Fu, Q Yang, X Li, G Tang, Y Jiang, J Wang, ... Scientific Reports 6 (1), 32186, 2016 | 32 | 2016 |
IAnimal: a cross-species omics knowledgebase for animals Y Fu, H Liu, J Dou, Y Wang, Y Liao, X Huang, Z Tang, JY Xu, D Yin, S Zhu, ... Nucleic acids research 51 (D1), D1312-D1324, 2023 | 26 | 2023 |
Whole genome variants across 57 pig breeds enable comprehensive identification of genetic signatures that underlie breed features J Xu, Y Fu, Y Hu, L Yin, Z Tang, D Yin, M Zhu, M Yu, X Li, Y Zhou, S Zhao, ... Journal of Animal Science and Biotechnology 11, 1-16, 2020 | 26 | 2020 |
Genomic Analyses Reveal Evidence of Independent Evolution, Demographic History, and Extreme Environment Adaptation of Tibetan Plateau Agaricus bisporus L Sun, Y Fu, Y Yang, X Wang, W Cui, D Li, X Yuan, Z Zhang, Y Fu, Y Li Frontiers in Microbiology 10, 1786, 2019 | 25 | 2019 |
Transcriptome analysis reveals long intergenic non-coding RNAs involved in skeletal muscle growth and development in pig C Zou, J Li, W Luo, L Li, A Hu, Y Fu, Y Hou, C Li Scientific reports 7 (1), 8704, 2017 | 25 | 2017 |
Genome-wide profiling of gene expression and DNA methylation provides insight into low-altitude acclimation in Tibetan pigs L Jin, K Mao, J Li, W Huang, T Che, Y Fu, Q Tang, P Liu, Y Song, R Liu, ... Gene 642, 522-532, 2018 | 23 | 2018 |
Metabolomic investigation of porcine muscle and fatty tissue after Clenbuterol treatment using gas chromatography/mass spectrometry G Li, Y Fu, X Han, X Li, C Li Journal of Chromatography A 1456, 242-248, 2016 | 23 | 2016 |