| The grid2003 production grid: Principles and practice I Foster, J Gieraltowski, S Gose, N Maltsev, E May, A Rodriguez, ... Proceedings. 13th IEEE International Symposium on High performance …, 2004 | 165 | 2004 |
| PUMA2—grid-based high-throughput analysis of genomes and metabolic pathways N Maltsev, E Glass, D Sulakhe, A Rodriguez, MH Syed, T Bompada, ... Nucleic acids research 34 (suppl_1), D369-D372, 2006 | 88 | 2006 |
| Experiences building Globus Genomics: a next‐generation sequencing analysis service using Galaxy, Globus, and Amazon Web Services RK Madduri, D Sulakhe, L Lacinski, B Liu, A Rodriguez, K Chard, ... Concurrency and Computation: Practice and Experience 26 (13), 2266-2279, 2014 | 87 | 2014 |
| The Globus Galaxies platform: delivering science gateways as a service R Madduri, K Chard, R Chard, L Lacinski, A Rodriguez, D Sulakhe, ... Concurrency and Computation: Practice and Experience 27 (16), 4344-4360, 2015 | 60 | 2015 |
| Bacteroidota and Lachnospiraceae integration into the gut microbiome at key time points in early life are linked to infant neurodevelopment K Oliphant, M Ali, M D’Souza, PD Hughes, D Sulakhe, AZ Wang, B Xie, ... Gut Microbes 13 (1), 1997560, 2021 | 58 | 2021 |
| Reproducible big data science: A case study in continuous FAIRness R Madduri, K Chard, M D’Arcy, SC Jung, A Rodriguez, D Sulakhe, ... PloS one 14 (4), e0213013, 2019 | 58 | 2019 |
| CaGrid Workflow Toolkit: A taverna based workflow tool for cancer grid W Tan, R Madduri, A Nenadic, S Soiland-Reyes, D Sulakhe, I Foster, ... BMC bioinformatics 11, 1-12, 2010 | 45 | 2010 |
| Lynx: a database and knowledge extraction engine for integrative medicine D Sulakhe, S Balasubramanian, B Xie, B Feng, A Taylor, S Wang, ... Nucleic acids research 42 (D1), D1007-D1012, 2014 | 43 | 2014 |
| Exploring the functional impact of alternative splicing on human protein isoforms using available annotation sources D Sulakhe, M D’Souza, S Wang, S Balasubramanian, P Athri, B Xie, ... Briefings in bioinformatics 20 (5), 1754-1768, 2019 | 35 | 2019 |
| A case study for cloud based high throughput analysis of NGS data using the globus genomics system K Bhuvaneshwar, D Sulakhe, R Gauba, A Rodriguez, R Madduri, U Dave, ... Computational and structural biotechnology journal 13, 64-74, 2015 | 33 | 2015 |
| Gnare: automated system for high-throughput genome analysis with grid computational backend D Sulakhe, A Rodriguez, M D'Souza, M Wilde, V Nefedova, I Foster, ... Journal of clinical monitoring and computing 19, 361-369, 2005 | 29 | 2005 |
| Gnare: an environment for grid-based high-throughput genome analysis D Sulakhe, A Rodriguez, M D'Souza, M Wilde, V Nefedova, I Foster, ... CCGrid 2005. IEEE International Symposium on Cluster Computing and the Grid …, 2005 | 27 | 2005 |
| Scientific workflows as services in caGrid: a Taverna and gRAVI approach W Tan, K Chard, D Sulakhe, R Madduri, I Foster, S Soiland-Reyes, ... 2009 IEEE International Conference on Web Services, 413-420, 2009 | 25 | 2009 |
| Unique somatic variants in DNA from urine exosomes of individuals with bladder cancer X Zhou, P Kurywchak, K Wolf-Dennen, SPY Che, D Sulakhe, M D’Souza, ... Molecular Therapy Methods & Clinical Development 22, 360-376, 2021 | 21 | 2021 |
| Experiences in building a next-generation sequencing analysis service using galaxy, globus online and Amazon web service RK Madduri, P Dave, D Sulakhe, L Lacinski, B Liu, IT Foster Proceedings of the Conference on Extreme Science and Engineering Discovery …, 2013 | 21 | 2013 |
| High-throughput translational medicine: challenges and solutions D Sulakhe, S Balasubramanian, B Xie, E Berrocal, B Feng, A Taylor, ... Systems Analysis of Human Multigene Disorders, 39-67, 2014 | 17 | 2014 |
| High-fat diet alters the retinal transcriptome in the absence of gut microbiota D Dao, B Xie, U Nadeem, J Xiao, A Movahedan, M D’souza, V Leone, ... Cells 10 (8), 2119, 2021 | 15 | 2021 |
| Grid enabled server for high-throughput analysis of genomes A Rodriguez, D Sulakhe, E Marland, N Nefedova, M Wilde, N Maltsev Workshop on Case Studies on Grid Applications, 2004 | 15 | 2004 |
| High throughput RNA sequencing of germ-free mouse retina reveals metabolic pathways involved in the gut-retina axis U Nadeem, B Xie, A Movahedan, M D’Souza, H Barba, N Deng, ... bioRxiv, 2020.10. 01.318949, 2020 | 14 | 2020 |
| Absence of gut microbiota is associated with RPE/choroid transcriptomic changes related to age-related macular degeneration pathobiology and decreased choroidal neovascularization JY Zhang, B Xie, H Barba, U Nadeem, A Movahedan, N Deng, M Spedale, ... International journal of molecular sciences 23 (17), 9676, 2022 | 13 | 2022 |
Mark D'SouzaUniversity of Chicago, Argonne National Laboratory在 uchicago.edu 的电子邮件经过验证