24-nt reproductive phasiRNAs are broadly present in angiosperms R Xia, C Chen, S Pokhrel, W Ma, K Huang, P Patel, F Wang, J Xu, Z Liu, ... Nature communications 10 (1), 627, 2019 | 121 | 2019 |
sPARTA: a parallelized pipeline for integrated analysis of plant miRNA and cleaved mRNA data sets, including new miRNA target-identification software A Kakrana, R Hammond, P Patel, M Nakano, BC Meyers Nucleic acids research 42 (18), e139-e139, 2014 | 92 | 2014 |
Plant 24-nt reproductive phasiRNAs from intramolecular duplex mRNAs in diverse monocots A Kakrana, SM Mathioni, K Huang, R Hammond, L Vandivier, P Patel, ... Genome research 28 (9), 1333-1344, 2018 | 51 | 2018 |
Reproductive phasiRNAs in grasses are compositionally distinct from other classes of small RNAs P Patel, S Mathioni, A Kakrana, H Shatkay, BC Meyers New Phytologist 220 (3), 851-864, 2018 | 29 | 2018 |
PHASIS: A computational suite for de novo discovery and characterization of phased, siRNA-generating loci and their miRNA triggers A Kakrana, P Li, P Patel, R Hammond, D Anand, S Mathioni, B Meyers bioRxiv, 158832, 2017 | 29 | 2017 |
Reproductive phasiRNA loci and DICER-LIKE5, but not microRNA loci, diversified in monocotyledonous plants P Patel, SM Mathioni, R Hammond, AE Harkess, A Kakrana, S Arikit, ... Plant Physiology 185 (4), 1764-1782, 2021 | 24 | 2021 |
miTRATA: a web-based tool for microRNA Truncation and Tailing Analysis P Patel, SD Ramachandruni, A Kakrana, M Nakano, BC Meyers Bioinformatics 32 (3), 450-452, 2016 | 23 | 2016 |
The evolutionary history of small RNAs in Solanaceae P Baldrich, S Bélanger, S Kong, S Pokhrel, S Tamim, C Teng, ... Plant Physiology 189 (2), 644-665, 2022 | 16 | 2022 |
miRador: a fast and precise tool for the prediction of plant miRNAs RK Hammond, P Gupta, P Patel, BC Meyers Plant Physiology 191 (2), 894-903, 2023 | 7 | 2023 |
NeRvolver: a computational intelligence-based system for automated construction, tuning, and analysis of neuronal models E Forren, M Johnson-Gray, P Patel, TG Smolinski BMC Neuroscience 13, 1-2, 2012 | 3 | 2012 |
Hybridization of multi-objective evolutionary algorithms and fuzzy control for automated construction, tuning, and analysis of neuronal models P Patel, M Johnson-Gray, E Forren, A Malik, TG Smolinski BMC Neuroscience 14, 1-2, 2013 | 2 | 2013 |
Fast multiple-trait genome-wide association analysis for correlated longitudinal measurements G Abdel-Azim, P Patel, S Li, S Guo, MH Black https://www.nature.com/articles/s41598-023-47555-1, 2023 | | 2023 |
Supervised Machine Learning for Small RNA Informatics and Big Data Analytics in Plants P Patel University of Delaware, 2019 | | 2019 |
A computational intelligence approach to evaluation of membrane conductance interactions underlying persistent spiking, the fI curve, and adaptive properties of medial … T Smolinski, P Patel, E Fransén, M Hasselmo, N Schultheiss 2012 Neuroscience Meeting Planner. New Orleans, LA: Society for Neuroscience …, 2012 | | 2012 |
Machine Learning Identifies Unique Features of Reproductive Phased, Secondary, Small Interfering RNAs in Rice and Maize PU Patel, S Mathioni, A Kakrana, H Shatkay, B Meyers Plant and Animal Genome XXVI Conference (January 13-17, 2018), 0 | | |