Computational approaches to predict protein–protein interactions in crowded cellular environments

G Grassmann, M Miotto, F Desantis… - Chemical …, 2024 - ACS Publications
Investigating protein–protein interactions is crucial for understanding cellular biological
processes because proteins often function within molecular complexes rather than in …

Nanoparticle characterization: what to measure?

MM Modena, B Rühle, TP Burg, S Wuttke - Advanced Materials, 2019 - Wiley Online Library
What to measure? is a key question in nanoscience, and it is not straightforward to address
as different physicochemical properties define a nanoparticle sample. Most prominent …

Toward dynamic structural biology: Two decades of single-molecule Förster resonance energy transfer

E Lerner, T Cordes, A Ingargiola, Y Alhadid, SY Chung… - Science, 2018 - science.org
BACKGROUND Biomolecular mechanisms are typically inferred from static structural
“snapshots” obtained by x-ray crystallography, nuclear magnetic resonance (NMR) …

A comprehensive review of fluorescence correlation spectroscopy

L Yu, Y Lei, Y Ma, M Liu, J Zheng, D Dan, P Gao - Frontiers in physics, 2021 - frontiersin.org
Fluorescence correlation spectroscopy (FCS) is a powerful technique for quantification of
molecular dynamics, and it has been widely applied in diverse fields, eg, biomedicine …

Harmonizing the growing fluorogenic RNA aptamer toolbox for RNA detection and imaging

X Lu, KYS Kong, PJ Unrau - Chemical Society Reviews, 2023 - pubs.rsc.org
The field of fluorogenic RNA aptamers is a burgeoning research area that aims to address
the lack of naturally fluorescent RNA molecules for RNA detection and imaging. These small …

Anomalous transport in the crowded world of biological cells

F Höfling, T Franosch - Reports on Progress in Physics, 2013 - iopscience.iop.org
A ubiquitous observation in cell biology is that the diffusive motion of macromolecules and
organelles is anomalous, and a description simply based on the conventional diffusion …

Fluorescent proteins and their applications in imaging living cells and tissues

DM Chudakov, MV Matz, S Lukyanov… - Physiological …, 2010 - journals.physiology.org
Green fluorescent protein (GFP) from the jellyfish Aequorea victoria and its homologs from
diverse marine animals are widely used as universal genetically encoded fluorescent labels …

[KNIHA][B] Handbook of fluorescence spectroscopy and imaging: from ensemble to single molecules

M Sauer, J Hofkens, J Enderlein - 2010 - books.google.com
Providing much-needed information on fluorescence spectroscopy and microscopy, this
ready reference covers detection techniques, data registration, and the use of spectroscopic …

A plasmonic 'antenna-in-box'platform for enhanced single-molecule analysis at micromolar concentrations

D Punj, M Mivelle, SB Moparthi, TS Van Zanten… - Nature …, 2013 - nature.com
Single-molecule fluorescence techniques,, are key for a number of applications, including
DNA sequencing,, molecular and cell biology, and early diagnosis. Unfortunately …

Fluorescence correlation spectroscopy: past, present, future

EL Elson - Biophysical journal, 2011 - cell.com
In recent years fluorescence correlation spectroscopy (FCS) has become a routine method
for determining diffusion coefficients, chemical rate constants, molecular concentrations …