Analysing ecological networks of species interactions

E Delmas, M Besson, MH Brice, LA Burkle… - Biological …, 2019 - Wiley Online Library
Network approaches to ecological questions have been increasingly used, particularly in
recent decades. The abstraction of ecological systems–such as communities–through …

A roadmap towards predicting species interaction networks (across space and time)

T Strydom, MD Catchen, F Banville… - … of the Royal …, 2021 - royalsocietypublishing.org
Networks of species interactions underpin numerous ecosystem processes, but
comprehensively sampling these interactions is difficult. Interactions intrinsically vary across …

Global knowledge gaps in species interaction networks data

T Poisot, G Bergeron, K Cazelles, T Dallas… - Journal of …, 2021 - Wiley Online Library
Ecological networks are increasingly studied at large spatial scales, expanding their focus
from a conceptual tool for community ecology into one that also addresses questions in …

Inferring predator–prey interactions in food webs

JPF Pomeranz, RM Thompson, T Poisot… - Methods in Ecology …, 2019 - Wiley Online Library
Food webs are a powerful way to represent the diversity, structure, and function of ecological
systems. However, the accurate description of food webs requires significant effort in time …

Key questions for next-generation biomonitoring

A Makiola, ZG Compson, DJ Baird… - Frontiers in …, 2020 - frontiersin.org
Classical biomonitoring techniques have focused primarily on measures linked to various
biodiversity metrics and indicator species. Next-generation biomonitoring (NGB) describes a …

[PDF][PDF] Imputing the mammalian virome with linear filtering and singular value decomposition

T Poisot, MA Ouellet, N Mollentze, MJ Farrell… - arxiv preprint arxiv …, 2021 - academia.edu
Abstract At most 1-2% of the global virome has been sampled to date. Here, we develop a
novel method that combines Linear Filtering (LF) and Singular Value Decomposition (SVD) …

Decision‐making under uncertainty for species introductions into ecological networks

LB Van Kleunen, KA Peterson, MT Hayden… - Ecology …, 2023 - Wiley Online Library
Ecological communities are increasingly subject to natural and human‐induced additions of
species, as species shift their ranges under climate change, are introduced for conservation …

Pairwise learning for predicting pollination interactions based on traits and phylogeny

M Stock, N Piot, S Vanbesien, J Meys, G Smagghe… - Ecological …, 2021 - Elsevier
Mutualistic bee–plant interaction networks are a vital part of terrestrial ecosystems. They
frequently arise through co-evolutionary processes, which match the traits of both partners …

Finding missing links in interaction networks

JCD Terry, OT Lewis - Ecology, 2020 - Wiley Online Library
Documenting which species interact within ecological communities is challenging and labor
intensive. As a result, many interactions remain unrecorded, potentially distorting our …

EcologicalNetworks. jl: analysing ecological networks of species interactions

T Poisot, Z Bélisle, L Hoebeke, M Stock, P Szefer - Ecography, 2019 - Wiley Online Library
Networks are a convenient way to represent many interactions among ecological entities.
The analysis of ecological networks is challenging for two reasons. First, there is a plethora …