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Scaling read aligners to hundreds of threads on general-purpose processors
Motivation General-purpose processors can now contain many dozens of processor cores
and support hundreds of simultaneous threads of execution. To make best use of these …
and support hundreds of simultaneous threads of execution. To make best use of these …
[HTML][HTML] A taxonomy of task-based parallel programming technologies for high-performance computing
Task-based programming models for shared memory—such as Cilk Plus and OpenMP 3—
are well established and documented. However, with the increase in parallel, many-core …
are well established and documented. However, with the increase in parallel, many-core …
A survey of algorithmic skeleton frameworks: high‐level structured parallel programming enablers
Structured parallel programs ought to be conceived as two separate and complementary
entities: computation, which expresses the calculations in a procedural manner, and …
entities: computation, which expresses the calculations in a procedural manner, and …
A massively parallel and scalable multi-GPU material point method
Harnessing the power of modern multi-GPU architectures, we present a massively parallel
simulation system based on the Material Point Method (MPM) for simulating physical …
simulation system based on the Material Point Method (MPM) for simulating physical …
[HTML][HTML] PARMA-CC: A family of parallel multiphase approximate cluster combining algorithms
Clustering is a common task in data analysis applications. Despite the extensive literature,
the continuously increasing volumes of data produced by sensors (eg, rates of several MB/s …
the continuously increasing volumes of data produced by sensors (eg, rates of several MB/s …
Tasking framework for adaptive speculative parallel mesh generation
Handling the ever-increasing complexity of mesh generation codes along with the intricacies
of newer hardware often results in codes that are both difficult to comprehend and maintain …
of newer hardware often results in codes that are both difficult to comprehend and maintain …
The challenges of elastic in situ analysis and visualization
In situ analysis and visualization have been proposed in high-performance computing
(HPC) to enable executing analysis tasks while a simulation is running, bypassing the …
(HPC) to enable executing analysis tasks while a simulation is running, bypassing the …
Parallel planning of Marine Observation Tasks Based on threading building blocks
Marine monitoring has diverse targets. How to complete the observation over marine targets
to the largest extent by reasonably and efficiently allocating various observation platform …
to the largest extent by reasonably and efficiently allocating various observation platform …
ZNNi: maximizing the inference throughput of 3D convolutional networks on CPUs and GPUs
Sliding window convolutional networks (ConvNets) have become a popular approach to
computer vision problems such as image segmentation and object detection and …
computer vision problems such as image segmentation and object detection and …
SLPA-based parallel overlap** community detection approach in large complex social networks
A Mahabadi, M Hosseini - Multimedia tools and applications, 2021 - Springer
Performance improvement of community detection is an NP problem in large social networks
analysis where by integrating the overlapped communities' information and modularity …
analysis where by integrating the overlapped communities' information and modularity …