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Using graph theory to analyze biological networks
Understanding complex systems often requires a bottom-up analysis towards a systems
biology approach. The need to investigate a system, not only as individual components but …
biology approach. The need to investigate a system, not only as individual components but …
Analyzing and modeling real-world phenomena with complex networks: a survey of applications
The success of new scientific areas can be assessed by their potential in contributing to new
theoretical approaches and in applications to real-world problems. Complex networks have …
theoretical approaches and in applications to real-world problems. Complex networks have …
What is a complex system?
Complex systems research is becoming ever more important in both the natural and social
sciences. It is commonly implied that there is such a thing as a complex system, different …
sciences. It is commonly implied that there is such a thing as a complex system, different …
[KNIHA][B] Physical biology of the cell
Physical Biology of the Cell is a textbook for a first course in physical biology or biophysics
for undergraduate or graduate students. It maps the huge and complex landscape of cell …
for undergraduate or graduate students. It maps the huge and complex landscape of cell …
The physics of polymer chain-folding
W Hu - Physics Reports, 2018 - Elsevier
Chain-folding represents a motif configuration in lamellar polymer crystals as well as in
protein beta-sheets. This report presents a survey on our current understanding about …
protein beta-sheets. This report presents a survey on our current understanding about …
Optimized PAR-2 RING dimerization mediates cooperative and selective membrane binding for robust cell polarity
Cell polarity networks are defined by quantitative features of their constituent feedback
circuits, which must be tuned to enable robust and stable polarization, while also ensuring …
circuits, which must be tuned to enable robust and stable polarization, while also ensuring …
Carnot cycle at finite power: attainability of maximal efficiency
We want to understand whether and to what extent the maximal (Carnot) efficiency for heat
engines can be reached at a finite power. To this end we generalize the Carnot cycle so that …
engines can be reached at a finite power. To this end we generalize the Carnot cycle so that …
Conditional cooperativity in toxin–antitoxin regulation prevents random toxin activation and promotes fast translational recovery
Many toxin–antitoxin (TA) loci are known to strongly repress their own transcription. This
auto-inhibition is often called 'conditional cooperativity'as it relies on cooperative binding of …
auto-inhibition is often called 'conditional cooperativity'as it relies on cooperative binding of …
Nonlinear electrostatics: the Poisson–Boltzmann equation
CG Gray, PJ Stiles - European Journal of Physics, 2018 - iopscience.iop.org
The description of a conducting medium in thermal equilibrium, such as an electrolyte
solution or a plasma, involves nonlinear electrostatics, a subject rarely discussed in the …
solution or a plasma, involves nonlinear electrostatics, a subject rarely discussed in the …
Polymers under confinement: single polymers, how they interact, and as model chromosomes
BY Ha, Y Jung - Soft Matter, 2015 - pubs.rsc.org
How confinement or a physical constraint modifies polymer chains is not only a classical
problem in polymer physics but also relevant in a variety of contexts such as single-molecule …
problem in polymer physics but also relevant in a variety of contexts such as single-molecule …