The potential of genomics for infectious disease forecasting

JE Stockdale, P Liu, C Colijn - Nature Microbiology, 2022 - nature.com
Genomic technologies have led to tremendous gains in understanding how pathogens
function, evolve and interact. Pathogen diversity is now measurable at high precision and …

Vibrio cholerae, classification, pathogenesis, immune response, and trends in vaccine development

DA Montero, RM Vidal, J Velasco, S George… - Frontiers in …, 2023 - frontiersin.org
Vibrio cholerae is the causative agent of cholera, a highly contagious diarrheal disease
affecting millions worldwide each year. Cholera is a major public health problem, primarily in …

Population genomics of Escherichia coli in livestock-kee** households across a rapidly develo** urban landscape

DM Muloi, BA Wee, DMH McClean, MJ Ward… - Nature …, 2022 - nature.com
Quantitative evidence for the risk of zoonoses and the spread of antimicrobial resistance
remains lacking. Here, as part of the UrbanZoo project, we sampled Escherichia coli from …

[HTML][HTML] Challenges of testing COVID-19 cases in Bangladesh

KR Rahaman, MS Mahmud, B Mallick - International Journal of …, 2020 - mdpi.com
Kee** the dynamic nature of Coronaviruses (COVID-19) pandemic in mind, we have
opted to explore the importance of the decentralization of COVID-19 testing centers across …

Vibrio cholerae O139 genomes provide a clue to why it may have failed to usher in the eighth cholera pandemic

T Ramamurthy, AK Pragasam, A Taylor-Brown… - Nature …, 2022 - nature.com
Cholera is a life-threatening infectious disease that remains an important public health issue
in several low and middle-income countries. In 1992, a newly identified O139 Vibrio …

Prevention and control of cholera with household and community water, sanitation and hygiene (WASH) interventions: a sco** review of current international …

L D'Mello-Guyett, K Gallandat, R Van den Bergh… - PLoS …, 2020 - journals.plos.org
Introduction Cholera remains a frequent cause of outbreaks globally, particularly in areas
with inadequate water, sanitation and hygiene (WASH) services. Cholera is spread through …

Genomic epidemiology of Vibrio cholerae reveals the regional and global spread of two epidemic non-toxigenic lineages

H Wang, C Yang, Z Sun, W Zheng… - PLoS neglected …, 2020 - journals.plos.org
Non-toxigenic Vibrio cholerae isolates have been found associated with diarrheal disease
globally, however, the global picture of non-toxigenic infections is largely unknown. Among …

Evaluation of DNA extraction methods on individual helminth egg and larval stages for whole-genome sequencing

SR Doyle, G Sankaranarayanan, F Allan… - Frontiers in …, 2019 - frontiersin.org
Whole-genome sequencing is being rapidly applied to the study of helminth genomes,
including de novo genome assembly, population genetics, and diagnostic applications …

Molecular and epidemiologic analysis of diarrheal pathogens in children with acute gastroenteritis in Bangladesh during 2014–2019

N Sharif, NU Nobel, N Sakib, SM Liza… - The Pediatric …, 2020 - journals.lww.com
Background: Diarrheal disease is one of the leading causes of childhood morbidity and
mortality in the 21st century in develo** countries. Mainly infants and young children …

Predicting Vibrio cholerae Infection and Disease Severity Using Metagenomics in a Prospective Cohort Study

I Levade, MM Saber, FS Midani… - The Journal of …, 2021 - academic.oup.com
Abstract Background Susceptibility to Vibrio cholerae infection is affected by blood group,
age, and preexisting immunity, but these factors only partially explain who becomes …