Synthetic biology in mammalian cells: next generation research tools and therapeutics

F Lienert, JJ Lohmueller, A Garg… - Nature reviews Molecular …, 2014 - nature.com
Recent progress in DNA manipulation and gene circuit engineering has greatly improved
our ability to programme and probe mammalian cell behaviour. These advances have led to …

[HTML][HTML] Manipulating gene expression levels in mammalian cell factories: An outline of synthetic molecular toolboxes to achieve multiplexed control

P Eisenhut, N Marx, G Borsi, M Papež, C Ruggeri… - New …, 2024 - Elsevier
Mammalian cells have developed dedicated molecular mechanisms to tightly control
expression levels of their genes where the specific transcriptomic signature across all genes …

Engineering genetic circuit interactions within and between synthetic minimal cells

KP Adamala, DA Martin-Alarcon, KR Guthrie-Honea… - Nature …, 2017 - nature.com
Genetic circuits and reaction cascades are of great importance for synthetic biology,
biochemistry and bioengineering. An open question is how to maximize the modularity of …

Precision calcium imaging of dense neural populations via a cell-body-targeted calcium indicator

OA Shemesh, C Linghu, KD Piatkevich, D Goodwin… - Neuron, 2020 - cell.com
Methods for one-photon fluorescent imaging of calcium dynamics can capture the activity of
hundreds of neurons across large fields of view at a low equipment complexity and cost. In …

A tunable orthogonal coiled-coil interaction toolbox for engineering mammalian cells

T Lebar, D Lainšček, E Merljak, J Aupič… - Nature chemical …, 2020 - nature.com
Protein interactions guide most cellular processes. Orthogonal hetero-specific protein–
protein interaction domains may facilitate better control of engineered biological systems …

Modular extracellular sensor architecture for engineering mammalian cell-based devices

NM Daringer, RM Dudek, KA Schwarz… - ACS synthetic …, 2014 - ACS Publications
Engineering mammalian cell-based devices that monitor and therapeutically modulate
human physiology is a promising and emerging frontier in clinical synthetic biology …

Recent advances in in vivo applications of intein-mediated protein splicing

NI Topilina, KV Mills - Mobile Dna, 2014 - Springer
Intein-mediated protein splicing has become an essential tool in modern biotechnology.
Fundamental progress in the structure and catalytic strategies of cis-and trans-splicing …

Chemical biology strategies for posttranslational control of protein function

R Rakhit, R Navarro, TJ Wandless - Chemistry & biology, 2014 - cell.com
A common strategy to understand a biological system is to selectively perturb it and observe
its response. Although technologies now exist to manipulate cellular systems at the genetic …

Programmable RNA-binding protein composed of repeats of a single modular unit

KP Adamala, DA Martin-Alarcon… - Proceedings of the …, 2016 - National Acad Sciences
The ability to monitor and perturb RNAs in living cells would benefit greatly from a modular
protein architecture that targets unmodified RNA sequences in a programmable way. We …

DNA sense-and-respond protein modules for mammalian cells

S Slomovic, JJ Collins - Nature methods, 2015 - nature.com
We generated synthetic protein components that can detect specific DNA sequences and
subsequently trigger a desired intracellular response. These modular sensors exploit the …