Trade-offs between plant growth and defense against insect herbivory: an emerging mechanistic synthesis

T Züst, AA Agrawal - Annual review of plant biology, 2017 - annualreviews.org
Costs of defense are central to our understanding of interactions between organisms and
their environment, and defensive phenotypes of plants have long been considered to be …

Genetics as a key to improving crop photosynthesis

TPJM Theeuwen, LL Logie, J Harbinson… - Journal of …, 2022 - academic.oup.com
Since the basic biochemical mechanisms of photosynthesis are remarkably conserved
among plant species, genetic modification approaches have so far been the main route to …

Higher-order genetic interactions and their contribution to complex traits

MB Taylor, IM Ehrenreich - Trends in genetics, 2015 - cell.com
The contribution of genetic interactions involving three or more loci to complex traits is poorly
understood. These higher-order genetic interactions (HGIs) are difficult to detect in genetic …

Genome-wide association studies identify loci controlling specialized seed metabolites in Arabidopsis

T Naake, F Zhu, S Alseekh, F Scossa… - Plant …, 2024 - academic.oup.com
Plants synthesize specialized metabolites to facilitate environmental and ecological
interactions. During evolution, plants diversified in their potential to synthesize these …

False idolatry of the mythical growth versus immunity tradeoff in molecular systems plant pathology

DJ Kliebenstein - Physiological and Molecular Plant Pathology, 2016 - Elsevier
Abstract Systems studies of signal transduction pathways that modulate plant growth and
immunity are rapidly identifying a large number of interactions within these pathways. These …

Cytoplasmic genetic variation and extensive cytonuclear interactions influence natural variation in the metabolome

B Joseph, JA Corwin, B Li, S Atwell, DJ Kliebenstein - Elife, 2013 - elifesciences.org
Understanding genome to phenotype linkages has been greatly enabled by genomic
sequencing. However, most genome analysis is typically confined to the nuclear genome …

Natural diversity in daily rhythms of gene expression contributes to phenotypic variation

A De Montaigu, A Giakountis, M Rubin… - Proceedings of the …, 2015 - National Acad Sciences
Daily rhythms of gene expression provide a benefit to most organisms by ensuring that
biological processes are activated at the optimal time of day. Although temporal patterns of …

Cytonuclear interactions affect adaptive traits of the annual plant Arabidopsis thaliana in the field

F Roux, T Mary-Huard, E Barillot… - Proceedings of the …, 2016 - National Acad Sciences
Although the contribution of cytonuclear interactions to plant fitness variation is relatively
well documented at the interspecific level, the prevalence of cytonuclear interactions at the …

Genome-wide association map** and genomic prediction elucidate the genetic architecture of morphological traits in Arabidopsis

R Kooke, W Kruijer, R Bours, F Becker, A Kuhn… - Plant …, 2016 - academic.oup.com
Quantitative traits in plants are controlled by a large number of genes and their interaction
with the environment. To disentangle the genetic architecture of such traits, natural variation …

Reciprocal cybrids reveal how organellar genomes affect plant phenotypes

PJ Flood, TPJM Theeuwen, K Schneeberger, P Keizer… - Nature Plants, 2020 - nature.com
Assessment of the impact of variation in chloroplast and mitochondrial DNA (collectively
termed the plasmotype) on plant phenotypes is challenging due to the difficulty in separating …