A field guide to whole‐genome sequencing, assembly and annotation

R Ekblom, JBW Wolf - Evolutionary applications, 2014 - Wiley Online Library
Genome sequencing projects were long confined to biomedical model organisms and
required the concerted effort of large consortia. Rapid progress in high‐throughput …

Genomics and the future of conservation genetics

FW Allendorf, PA Hohenlohe, G Luikart - Nature reviews genetics, 2010 - nature.com
We will soon have complete genome sequences from thousands of species, as well as from
many individuals within species. This coming explosion of information will transform our …

[KSIĄŻKA][B] Biological diversity: frontiers in measurement and assessment

AE Magurran, BJ McGill - 2010 - books.google.com
Biological Diversity provides an up to date, authoritative review of the methods of measuring
and assessing biological diversity, together with their application. The book's emphasis is on …

Applications of next generation sequencing in molecular ecology of non-model organisms

R Ekblom, J Galindo - Heredity, 2011 - nature.com
As most biologists are probably aware, technological advances in molecular biology during
the last few years have opened up possibilities to rapidly generate large-scale sequencing …

The UCSC genome browser database: update 2011

PA Fujita, B Rhead, AS Zweig, AS Hinrichs… - Nucleic acids …, 2010 - academic.oup.com
Abstract The University of California, Santa Cruz Genome Browser (http://genome. ucsc.
edu) offers online access to a database of genomic sequence and annotation data for a …

Challenges and opportunities of genetic approaches to biological conservation

R Frankham - Biological conservation, 2010 - Elsevier
I discuss future challenges and opportunities in genetic approaches to biodiversity
conservation. Resolving taxonomy uncertainties and identifying diverged evolutionary units …

Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species

KR Bradnam, JN Fass, A Alexandrov, P Baranay… - …, 2013 - academic.oup.com
Background The process of generating raw genome sequence data continues to become
cheaper, faster, and more accurate. However, assembly of such data into high-quality …

How and why should we implement genomics into conservation?

BJ McMahon, EC Teeling… - Evolutionary …, 2014 - Wiley Online Library
Conservation genetics has provided important information into the dynamics of endangered
populations. The rapid development of genomic methods has posed an important question …

Genome 10K: a proposal to obtain whole-genome sequence for 10 000 vertebrate species

Genome 10K Community of Scientists - Journal of Heredity, 2009 - academic.oup.com
The human genome project has been recently complemented by whole-genome
assessment sequence of 32 mammals and 24 nonmammalian vertebrate species suitable …

Next‐generation metrics for monitoring genetic erosion within populations of conservation concern

G Leroy, EL Carroll, MW Bruford… - Evolutionary …, 2018 - Wiley Online Library
Genetic erosion is a major threat to biodiversity because it can reduce fitness and ultimately
contribute to the extinction of populations. Here, we explore the use of quantitative metrics to …