Genetic diversity and conservation units: dealing with the species-population continuum in the age of genomics
Current approaches to biodiversity conservation are largely based on geographic areas,
ecosystems, ecological communities, and species, with less attention on genetic diversity …
ecosystems, ecological communities, and species, with less attention on genetic diversity …
Practical considerations for plant phylogenomics
The past decade has seen a major breakthrough in our ability to easily and inexpensively
sequence genome‐scale data from diverse lineages. The development of high‐throughput …
sequence genome‐scale data from diverse lineages. The development of high‐throughput …
False gene and chromosome losses in genome assemblies caused by GC content variation and repeats
Background Many short-read genome assemblies have been found to be incomplete and
contain mis-assemblies. The Vertebrate Genomes Project has been producing new …
contain mis-assemblies. The Vertebrate Genomes Project has been producing new …
Bayesian divergence-time estimation with genome-wide single-nucleotide polymorphism data of sea catfishes (Ariidae) supports Miocene closure of the Panamanian …
The closure of the Isthmus of Panama has long been considered to be one of the best
defined biogeographic calibration points for molecular divergence-time estimation …
defined biogeographic calibration points for molecular divergence-time estimation …
[HTML][HTML] The role of DNA mismatch repair in immunotherapy of human cancer
Y He, L Zhang, R Zhou, Y Wang… - International Journal of …, 2022 - ncbi.nlm.nih.gov
DNA mismatch repair (MMR) is an important pathway which helps to maintain genomic
stability. Mutations in DNA MMR genes are found to promote cancer initiation and foster …
stability. Mutations in DNA MMR genes are found to promote cancer initiation and foster …
Allele phasing greatly improves the phylogenetic utility of ultraconserved elements
Advances in high-throughput sequencing techniques now allow relatively easy and
affordable sequencing of large portions of the genome, even for nonmodel organisms. Many …
affordable sequencing of large portions of the genome, even for nonmodel organisms. Many …
Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics
ABSTRACT Building the Tree of Life (ToL) is a major challenge of modern biology, requiring
advances in cyberinfrastructure, data collection, theory, and more. Here, we argue that …
advances in cyberinfrastructure, data collection, theory, and more. Here, we argue that …
Coalescent-based species delimitation is sensitive to geographic sampling and isolation by distance
Species are a fundamental unit of biodiversity that are delimited via genetic data and
coalescent-based methods with increasing frequency. Despite the widespread use of …
coalescent-based methods with increasing frequency. Despite the widespread use of …
Rapid Radiation and Rampant Reticulation: Phylogenomics of South American Liolaemus Lizards
Understanding the factors that cause heterogeneity among gene trees can increase the
accuracy of species trees. Discordant signals across the genome are commonly produced …
accuracy of species trees. Discordant signals across the genome are commonly produced …
DNA-based approaches for dairy products authentication: A review and perspectives
Background Food fraud has become an increasingly worldwide problem mainly driven by
rapid innovation in the food sector and constantly changing consumer's choices. This led to …
rapid innovation in the food sector and constantly changing consumer's choices. This led to …