Large-scale neural recordings call for new insights to link brain and behavior

AE Urai, B Doiron, AM Leifer, AK Churchland - Nature neuroscience, 2022 - nature.com
Neuroscientists today can measure activity from more neurons than ever before, and are
facing the challenge of connecting these brain-wide neural recordings to computation and …

Probing neural codes with two-photon holographic optogenetics

H Adesnik, L Abdeladim - Nature neuroscience, 2021 - nature.com
Optogenetics ushered in a revolution in how neuroscientists interrogate brain function.
Because of technical limitations, the majority of optogenetic studies have used low spatial …

A positively tuned voltage indicator for extended electrical recordings in the brain

SW Evans, DQ Shi, M Chavarha, MH Plitt, J Taxidis… - Nature …, 2023 - nature.com
Genetically encoded voltage indicators (GEVIs) enable optical recording of electrical signals
in the brain, providing subthreshold sensitivity and temporal resolution not possible with …

[HTML][HTML] Reconstruction of neocortex: Organelles, compartments, cells, circuits, and activity

NL Turner, T Macrina, JA Bae, R Yang, AM Wilson… - Cell, 2022 - cell.com
We assembled a semi-automated reconstruction of L2/3 mouse primary visual cortex from∼
250× 140× 90 μm 3 of electron microscopic images, including pyramidal and non-pyramidal …

Fluorescence imaging of large-scale neural ensemble dynamics

TH Kim, MJ Schnitzer - Cell, 2022 - cell.com
Recent progress in fluorescence imaging allows neuroscientists to observe the dynamics of
thousands of individual neurons, identified genetically or by their connectivity, across …

Representational drift in the mouse visual cortex

D Deitch, A Rubin, Y Ziv - Current biology, 2021 - cell.com
Recent studies have shown that neuronal representations gradually change over time
despite no changes in the stimulus, environment, or behavior. However, such …

Removing independent noise in systems neuroscience data using DeepInterpolation

J Lecoq, M Oliver, JH Siegle, N Orlova… - Nature …, 2021 - nature.com
Progress in many scientific disciplines is hindered by the presence of independent noise.
Technologies for measuring neural activity (calcium imaging, extracellular electrophysiology …

A comparison of neuronal population dynamics measured with calcium imaging and electrophysiology

Z Wei, BJ Lin, TW Chen, K Daie… - PLoS computational …, 2020 - journals.plos.org
Calcium imaging with fluorescent protein sensors is widely used to record activity in
neuronal populations. The transform between neural activity and calcium-related …

Sharing neurophysiology data from the Allen Brain Observatory

SEJ de Vries, JH Siegle, C Koch - Elife, 2023 - elifesciences.org
Nullius in verba ('trust no one'), chosen as the motto of the Royal Society in 1660, implies
that independently verifiable observations—rather than authoritative claims—are a defining …

High-speed low-light in vivo two-photon voltage imaging of large neuronal populations

J Platisa, X Ye, AM Ahrens, C Liu, IA Chen… - Nature …, 2023 - nature.com
Monitoring spiking activity across large neuronal populations at behaviorally relevant
timescales is critical for understanding neural circuit function. Unlike calcium imaging …