Metal ion modeling using classical mechanics
Metal ions play significant roles in numerous fields including chemistry, geochemistry,
biochemistry, and materials science. With computational tools increasingly becoming …
biochemistry, and materials science. With computational tools increasingly becoming …
The roles of intracellular proteolysis in cardiac ischemia–reperfusion injury
Ischemic heart disease remains a leading cause of human mortality worldwide. One form of
ischemic heart disease is ischemia–reperfusion injury caused by the reintroduction of blood …
ischemic heart disease is ischemia–reperfusion injury caused by the reintroduction of blood …
Guide to receptors and channels (GRAC)
Abstract The Fifth Edition of the 'Guide to Receptors and Channels' is a compilation of the
major pharmacological targets divided into seven sections: G protein‐coupled receptors …
major pharmacological targets divided into seven sections: G protein‐coupled receptors …
The concise guide to PHARMACOLOGY 2013/14: enzymes
SPH Alexander, HE Benson… - British Journal of …, 2013 - Wiley Online Library
Abstract The Concise Guide to PHARMACOLOGY 2013/14 provides concise overviews of
the key properties of over 2000 human drug targets with their pharmacology, plus links to an …
the key properties of over 2000 human drug targets with their pharmacology, plus links to an …
Polarizable molecular dynamics simulation of Zn (II) in water using the AMOEBA force field
The hydration free energy, structure, and dynamics of the zinc divalent cation are studied
using a polarizable force field in molecular dynamics simulations. Parameters for the Zn2+ …
using a polarizable force field in molecular dynamics simulations. Parameters for the Zn2+ …
[HTML][HTML] High levels of soluble CD73 unveil resistance to BRAF inhibitors in melanoma cells
C Giraulo, L Orlando, E Morretta, A Voli… - Biomedicine & …, 2024 - Elsevier
Melanoma cells express high levels of CD73 that produce extracellular immunosuppressive
adenosine. Changes in the CD73 expression occur in response to tumor environmental …
adenosine. Changes in the CD73 expression occur in response to tumor environmental …
Recent opportunities in matrix metalloproteinase inhibitor drug design for cancer
Y Zhong, YT Lu, Y Sun, ZH Shi, NG Li… - Expert opinion on …, 2018 - Taylor & Francis
Introduction: The overexpression of matrix metalloproteinase (MMP) plays an important role
in the context of tumor invasion and metastasis, and MMP-2 has been characterized as the …
in the context of tumor invasion and metastasis, and MMP-2 has been characterized as the …
Transition metal ion interactions with disordered amyloid-β peptides in the pathogenesis of Alzheimer's disease: insights from computational chemistry studies
Monomers and oligomers of the amyloid-β peptide aggregate to form the fibrils found in the
brains of Alzheimer's disease patients. These monomers and oligomers are largely …
brains of Alzheimer's disease patients. These monomers and oligomers are largely …
VFFDT: a new software for preparing AMBER force field parameters for metal-containing molecular systems
S Zheng, Q Tang, J He, S Du, S Xu… - Journal of chemical …, 2016 - ACS Publications
Force fields are fundamental to molecular dynamics simulations. However, the
incompleteness of force field parameters has been a long-standing problem, especially for …
incompleteness of force field parameters has been a long-standing problem, especially for …
Data-independent acquisition proteomics and N-terminomics methods reveal alterations in mitochondrial function and metabolism in ischemic-reperfused hearts
B Hartley, W Bassiouni, A Roczkowsky… - Journal of Proteome …, 2024 - ACS Publications
Myocardial ischemia-reperfusion (IR)(stunning) injury triggers changes in the proteome and
degradome of the heart. Here, we utilize quantitative proteomics and comprehensive …
degradome of the heart. Here, we utilize quantitative proteomics and comprehensive …