Regulation of disease-associated gene expression in the 3D genome

PHL Krijger, W De Laat - Nature reviews Molecular cell biology, 2016 - nature.com
Genetic variation associated with disease often appears in non-coding parts of the genome.
Understanding the mechanisms by which this phenomenon leads to disease is necessary to …

Topology of mammalian developmental enhancers and their regulatory landscapes

W De Laat, D Duboule - Nature, 2013 - nature.com
How a complex animal can arise from a fertilized egg is one of the oldest and most
fascinating questions of biology, the answer to which is encoded in the genome. Body shape …

LHX2- and LDB1-mediated trans interactions regulate olfactory receptor choice

K Monahan, A Horta, S Lomvardas - Nature, 2019 - nature.com
The genome is partitioned into topologically associated domains and genomic
compartments with shared chromatin valence. This architecture is constrained by the DNA …

[HTML][HTML] Simultaneous single-cell three-dimensional genome and gene expression profiling uncovers dynamic enhancer connectivity underlying olfactory receptor …

H Wu, J Zhang, F Jian, JP Chen, Y Zheng, L Tan… - Nature …, 2024 - nature.com
The simultaneous measurement of three-dimensional (3D) genome structure and gene
expression of individual cells is critical for understanding a genome's structure–function …

[HTML][HTML] Human olfactory receptors: novel cellular functions outside of the nose

D Maßberg, H Hatt - Physiological reviews, 2018 - journals.physiology.org
Olfactory receptors (ORs) are not exclusively expressed in the olfactory sensory neurons;
they are also observed outside of the olfactory system in all other human tissues tested to …

[HTML][HTML] CTCF: master weaver of the genome

JE Phillips, VG Corces - Cell, 2009 - cell.com
CTCF is a highly conserved zinc finger protein implicated in diverse regulatory functions,
including transcriptional activation/repression, insulation, imprinting, and X chromosome …

Long-range chromatin interactions

J Dekker, T Misteli - Cold Spring Harbor perspectives in …, 2015 - cshperspectives.cshlp.org
To accommodate genomes in the limited space of the cell nucleus and ensure the correct
execution of gene expression programs, genomes are packaged in complex fashion in the …

Principles of odor coding in vertebrates and artificial chemosensory systems

I Manzini, D Schild, C Di Natale - Physiological reviews, 2022 - journals.physiology.org
The biological olfactory system is the sensory system responsible for the detection of the
chemical composition of the environment. Several attempts to mimic biological olfactory …

The spatial organization of the human genome

WA Bickmore - Annual review of genomics and human genetics, 2013 - annualreviews.org
In vivo, the human genome functions as a complex, folded, three-dimensional chromatin
polymer. Understanding how the human genome is spatially organized and folded inside …

How is the olfactory map formed and interpreted in the mammalian brain?

K Mori, H Sakano - Annual review of neuroscience, 2011 - annualreviews.org
Odor signals received by odorant receptors (ORs) expressed by olfactory sensory neurons
(OSNs) in the olfactory epithelium (OE) are represented as an odor map in the olfactory bulb …